PDB entry 1ndg
View 1ndg on RCSB PDB site
Description: Crystal structure of Fab fragment of antibody HyHEL-8 complexed with its antigen lysozyme
Class: immune system/hydrolase
Keywords: antibody; lysozyme; mutant; HyHEL-8, IMMUNE SYSTEM/HYDROLASE COMPLEX
Deposited on
2002-12-09, released
2003-06-03
The last revision prior to the SCOPe 2.02 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.206
AEROSPACI score: 0.46
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: antibody kappa light chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- Uniprot P01837 (0-213)
- cloning artifact (0-1)
- cloning artifact (3)
Domains in SCOPe 2.02: d1ndga1, d1ndga2 - Chain 'B':
Compound: immunoglobulin gamma 1 chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.02: d1ndgb1, d1ndgb2 - Chain 'C':
Compound: Lysozyme C
Species: Gallus gallus [TaxId:9031]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.02: d1ndgc_ - Heterogens: ACY, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>1ndgA (A:)
divltqspatlsvtpgdsvslscrasqsisnnlhwyqqkshesprllikyasqsisgips
rfsgsgsgtdftlsinsvetedfgmyfcqqsnswpytfgggtkleikradaaptvsifpp
sseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstlt
ltkdeyerhnsytceathktstspivksfnrnec
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>1ndgB (B:)
evqlqesgpslvkpsqtlsltcsvtgdsiirdywswirkfpgnkleymgyisfsgntfyh
pslksrisitrdtsknqhylqlssvttedtatyycanwdgtywgegtlvtvsaakttaps
vyplapvcgdttgssvtlgclvkgyfpepvtltwnsgslssgvhtfpavlqsdlytlsss
vtvtsstwpsqsitcnvahpasstavdkki
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>1ndgC (C:)
kvfgrcelaaamkrhgldnyrgyslgnwvcaakfesnfntqatnrntdgstdygilqins
awwcndgrtpgsrnlcnipcsallssditasvncakkivsdgngmnawvawrnrckgtdv
qawirgcrl