PDB entry 1nbo

View 1nbo on RCSB PDB site
Description: The dual coenzyme specificity of photosynthetic glyceraldehyde-3-phosphate dehydrogenase interpreted by the crystal structure of A4 isoform complexed with NAD
Class: oxidoreductase
Keywords: Rossmann fold
Deposited on 2002-12-03, released 2003-05-13
The last revision prior to the SCOP 1.75 freeze date was dated 2003-05-13, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: 0.203
AEROSPACI score: 0.35 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: glyceraldehyde-3-phosphate dehydrogenase a
    Species: Spinacia oleracea
    Gene: GAPA
    Database cross-references and differences (RAF-indexed):
    • Uniprot P19866 (0-335)
      • cloning artifact (336)
    Domains in SCOP 1.75: d1nboa1, d1nboa2
  • Chain 'B':
    Compound: glyceraldehyde-3-phosphate dehydrogenase a
    Species: Spinacia oleracea
    Gene: GAPA
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d1nbob1, d1nbob2
  • Chain 'O':
    Compound: glyceraldehyde-3-phosphate dehydrogenase a
    Species: Spinacia oleracea
    Gene: GAPA
    Database cross-references and differences (RAF-indexed):
    • Uniprot P19866 (0-335)
      • cloning artifact (336)
    Domains in SCOP 1.75: d1nboo1, d1nboo2
  • Heterogens: SO4, NAD, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1nboA (A:)
klkvaingfgrigrnflrcwhgrkdspldvvvindtggvkqashllkydsilgtfdadvk
tagdsaisvdgkvikvvsdrnpvnlpwgdmgidlviegtgvfvdrdgagkhlqagakkvl
itapgkgdiptyvvgvneegythadtiisnascttnclapfvkvldqkfgiikgtmttth
sytgdqrlldashrdlrraraaclnivptstgaakavalvlpnlkgklngialrvptpnv
svvdlvvqvskktfaeevnaafresadnelkgilsvcdeplvsidfrctdvsstidsslt
mvmgddmvkviawydnewgysqrvvdladivankwqa

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1nboB (B:)
klkvaingfgrigrnflrcwhgrkdspldvvvindtggvkqashllkydsilgtfdadvk
tagdsaisvdgkvikvvsdrnpvnlpwgdmgidlviegtgvfvdrdgagkhlqagakkvl
itapgkgdiptyvvgvneegythadtiisnascttnclapfvkvldqkfgiikgtmttth
sytgdqrlldashrdlrraraaclnivptstgaakavalvlpnlkgklngialrvptpnv
svvdlvvqvskktfaeevnaafresadnelkgilsvcdeplvsidfrctdvsstidsslt
mvmgddmvkviawydnewgysqrvvdladivankwqa

    Sequence, based on observed residues (ATOM records): (download) 
    >1nboB (B:)
klkvaingfgrigrnflrcwhgrkdspldvvvindtggvkqashllkydsilgtfdadvk
tagdsaisvdgkvikvvsdrnpvnlpwgdmgidlviegtgvfvdrdgagkhlqagakkvl
itapgkgdiptyvvgvneegythadtiisnascttnclapfvkvldqkfgiikgtmttth
sytgdqrlldashrdlrraraaclnivptstgaakavalvlpnlkgklngialrvptpnv
svvdlvvqvskktfaeevnaafresadnelkgilsvcdeplvsidfrctdvsstidsslt
mvmgddmvkviawydnewgysqrvvdladivankwq

  • Chain 'O':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1nboO (O:)
klkvaingfgrigrnflrcwhgrkdspldvvvindtggvkqashllkydsilgtfdadvk
tagdsaisvdgkvikvvsdrnpvnlpwgdmgidlviegtgvfvdrdgagkhlqagakkvl
itapgkgdiptyvvgvneegythadtiisnascttnclapfvkvldqkfgiikgtmttth
sytgdqrlldashrdlrraraaclnivptstgaakavalvlpnlkgklngialrvptpnv
svvdlvvqvskktfaeevnaafresadnelkgilsvcdeplvsidfrctdvsstidsslt
mvmgddmvkviawydnewgysqrvvdladivankwqa