PDB entry 1n73

View 1n73 on RCSB PDB site
Description: Fibrin D-Dimer, Lamprey complexed with the PEPTIDE LIGAND: GLY-HIS-ARG-PRO-AMIDE
Class: blood clotting
Keywords: isopeptide cross-linked chains; protein-peptide complex, BLOOD CLOTTING
Deposited on 2002-11-12, released 2003-01-07
The last revision prior to the SCOPe 2.06 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-25.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: 0.258
AEROSPACI score: 0.17 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Fibrin alpha-1 chain
    Species: Petromyzon marinus [TaxId:7757]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P02674
      • see remark 999 (71)
    Domains in SCOPe 2.06: d1n73a_
  • Chain 'B':
    Compound: Fibrin beta chain
    Species: Petromyzon marinus [TaxId:7757]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1n73b1, d1n73b2
  • Chain 'C':
    Compound: Fibrin gamma chain
    Species: Petromyzon marinus [TaxId:7757]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1n73c1, d1n73c2
  • Chain 'D':
    Compound: Fibrin alpha-1 chain
    Species: Petromyzon marinus [TaxId:7757]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P02674
      • see remark 999 (71)
    Domains in SCOPe 2.06: d1n73d_
  • Chain 'E':
    Compound: Fibrin beta chain
    Species: Petromyzon marinus [TaxId:7757]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1n73e1, d1n73e2
  • Chain 'F':
    Compound: Fibrin gamma chain
    Species: Petromyzon marinus [TaxId:7757]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1n73f1, d1n73f2
  • Chain 'G':
    Compound: peptide ligand: Gly-his-Arg-Pro-amide
    Species: synthetic, synthetic
    Database cross-references and differences (RAF-indexed):
    • PDB 1N73 (0-3)
  • Chain 'H':
    Compound: peptide ligand: Gly-his-Arg-Pro-amide
    Species: synthetic, synthetic
    Database cross-references and differences (RAF-indexed):
    • PDB 1N73 (0-3)
  • Chain 'I':
    Compound: peptide ligand: Gly-his-Arg-Pro-amide
    Species: synthetic, synthetic
    Database cross-references and differences (RAF-indexed):
    • PDB 1N73 (0-3)
  • Chain 'J':
    Compound: peptide ligand: Gly-his-Arg-Pro-amide
    Species: synthetic, synthetic
    Database cross-references and differences (RAF-indexed):
    • PDB 1N73 (0-3)
  • Heterogens: NAG, CA

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1n73A (A:)
avsdtsgqtlnehnelevrysevlrelerriihlqrrinmqlqqltllqhniktqvsqil
rvevdidvalrackgscaryleyrldkeknlqlekaasyianlkferfeevvveetlnr

    Sequence, based on observed residues (ATOM records): (download) 
    >1n73A (A:)
evlrelerriihlqrrinmqlqqltllqhniktqvsqilrvevdidvalrackgscaryl
eyrldkeknlqlekaasyianlkferfeevv

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1n73B (B:)
ssthvnaqkeienrykevkiriestvagslrsmksvlehlrakmqrmeeaiktqkelcsa
pctvncrvpvvsgmhcediyrnggrtseayyiqpdlfsepykvfcdmeshgggwtvvqnr
vdgssnfardwntykaefgniafgngksicnipgeywlgtktvhqltkqhtqqvlfdmsd
wegssvyaqyasfrpeneaqgyrlwvedysgnagnallegatqlmgdnrtmtihngmqfs
tfdrdndnwnpgdptkhcsredaggwwynrchaanpngryywggiytkeqadygtddgvv
wmnwkgswysmrqmamklrpkwp

    Sequence, based on observed residues (ATOM records): (download) 
    >1n73B (B:)
aqkeienrykevkiriestvagslrsmksvlehlrakmqrmeeaiktqkelcsapctvnc
rvpvvsgmhcediyrnggrtseayyiqpdlfsepykvfcdmeshgggwtvvqnrvdgssn
fardwntykaefgniafgngksicnipgeywlgtktvhqltkqhtqqvlfdmsdwegssv
yaqyasfrpeneaqgyrlwvedysgnagnallegatqlmgdnrtmtihngmqfstfdrdn
dnwnpgdptkhcsredaggwwynrchaanpngryywggiytkeqadygtddgvvwmnwkg
swysmrqmamklrpk

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1n73C (C:)
dsgqktvqkileevrileqigvshdaqiqelsemwrvnqqfvtrlqqqlvdirqtcsrsc
qdttankispitgkdcqqvvdnggkdsglyyikplkakqpflvfceiengngwtviqhrh
dgsvnftrdwvsyregfgylaptlttefwlgnekihlltgqqayrlridltdwenthrya
dyghfkltpesdeyrlfysmyldgdagnafdgfdfgddpqdkfytthlgmlfstperdnd
kyegscaeqdgsgwwmnrchaghlngkyyfggnyrktdvefpyddgiiwatwhdrwyslk
mttmkllpmgrdlsghggqqqskgnsrgdn

    Sequence, based on observed residues (ATOM records): (download) 
    >1n73C (C:)
ktvqkileevrileqigvshdaqiqelsemwrvnqqfvtrlqqqlvdirqtcsrscqdtt
ankispitgkdcqqvvdnggkdsglyyikplkakqpflvfceiengngwtviqhrhdgsv
nftrdwvsyregfgylaptlttefwlgnekihlltgqqayrlridltdwenthryadygh
fkltpesdeyrlfysmyldgdagnafdgfdfgddpqdkfytthlgmlfstperdndkyeg
scaeqdgsgwwmnrchaghlngkyyfggnyrktdvefpyddgiiwatwhdrwyslkmttm
kllpmgrdlsghggqqqskgns

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1n73D (D:)
avsdtsgqtlnehnelevrysevlrelerriihlqrrinmqlqqltllqhniktqvsqil
rvevdidvalrackgscaryleyrldkeknlqlekaasyianlkferfeevvveetlnr

    Sequence, based on observed residues (ATOM records): (download) 
    >1n73D (D:)
ysevlrelerriihlqrrinmqlqqltllqhniktqvsqilrvevdidvalrackgscar
yleyrldkeknlqlekaasyianlkferfe

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >1n73E (E:)
ssthvnaqkeienrykevkiriestvagslrsmksvlehlrakmqrmeeaiktqkelcsa
pctvncrvpvvsgmhcediyrnggrtseayyiqpdlfsepykvfcdmeshgggwtvvqnr
vdgssnfardwntykaefgniafgngksicnipgeywlgtktvhqltkqhtqqvlfdmsd
wegssvyaqyasfrpeneaqgyrlwvedysgnagnallegatqlmgdnrtmtihngmqfs
tfdrdndnwnpgdptkhcsredaggwwynrchaanpngryywggiytkeqadygtddgvv
wmnwkgswysmrqmamklrpkwp

    Sequence, based on observed residues (ATOM records): (download) 
    >1n73E (E:)
aqkeienrykevkiriestvagslrsmksvlehlrakmqrmeeaiktqkelcsapctvnc
rvpvvsgmhcediyrnggrtseayyiqpdlfsepykvfcdmeshgggwtvvqnrvdgssn
fardwntykaefgniafgngksicnipgeywlgtktvhqltkqhtqqvlfdmsdwegssv
yaqyasfrpeneaqgyrlwvedysgnagnallegatqlmgdnrtmtihngmqfstfdrdn
dnwnpgdptkhcsredaggwwynrchaanpngryywggiytkeqadygtddgvvwmnwkg
swysmrqmamklrpk

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >1n73F (F:)
dsgqktvqkileevrileqigvshdaqiqelsemwrvnqqfvtrlqqqlvdirqtcsrsc
qdttankispitgkdcqqvvdnggkdsglyyikplkakqpflvfceiengngwtviqhrh
dgsvnftrdwvsyregfgylaptlttefwlgnekihlltgqqayrlridltdwenthrya
dyghfkltpesdeyrlfysmyldgdagnafdgfdfgddpqdkfytthlgmlfstperdnd
kyegscaeqdgsgwwmnrchaghlngkyyfggnyrktdvefpyddgiiwatwhdrwyslk
mttmkllpmgrdlsghggqqqskgnsrgdn

    Sequence, based on observed residues (ATOM records): (download) 
    >1n73F (F:)
ktvqkileevrileqigvshdaqiqelsemwrvnqqfvtrlqqqlvdirqtcsrscqdtt
ankispitgkdcqqvvdnggkdsglyyikplkakqpflvfceiengngwtviqhrhdgsv
nftrdwvsyregfgylaptlttefwlgnekihlltgqqayrlridltdwenthryadygh
fkltpesdeyrlfysmyldgdagnafdgfdfgddpqdkfytthlgmlfstperdndkyeg
scaeqdgsgwwmnrchaghlngkyyfggnyrktdvefpyddgiiwatwhdrwyslkmttm
kllpmgrdlsghggqqqskgns

  • Chain 'G':
    No sequence available.

  • Chain 'H':
    No sequence available.

  • Chain 'I':
    No sequence available.

  • Chain 'J':
    No sequence available.