PDB entry 1n5w

View 1n5w on RCSB PDB site
Description: Crystal Structure of the Cu,Mo-CO Dehydrogenase (CODH); Oxidized form
Class: oxidoreductase
Keywords: molybdopterin, molybdenum, MCD, oxidoreductase
Deposited on 2002-11-07, released 2002-12-23
The last revision prior to the SCOPe 2.03 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 1.5 Å
R-factor: 0.135
AEROSPACI score: 0.68 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Carbon monoxide dehydrogenase small chain
    Species: Oligotropha carboxidovorans [TaxId:504832]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d1n5wa1, d1n5wa2
  • Chain 'B':
    Compound: Carbon monoxide dehydrogenase large chain
    Species: Oligotropha carboxidovorans [TaxId:504832]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d1n5wb1, d1n5wb2
  • Chain 'C':
    Compound: Carbon monoxide dehydrogenase medium chain
    Species: Oligotropha carboxidovorans [TaxId:504832]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d1n5wc1, d1n5wc2
  • Chain 'D':
    Compound: Carbon monoxide dehydrogenase small chain
    Species: Oligotropha carboxidovorans [TaxId:504832]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d1n5wd1, d1n5wd2
  • Chain 'E':
    Compound: Carbon monoxide dehydrogenase large chain
    Species: Oligotropha carboxidovorans [TaxId:504832]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d1n5we1, d1n5we2
  • Chain 'F':
    Compound: Carbon monoxide dehydrogenase medium chain
    Species: Oligotropha carboxidovorans [TaxId:504832]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d1n5wf1, d1n5wf2
  • Heterogens: PO4, FES, CUM, MCN, FAD, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1n5wA (A:)
makahieltinghpvealveprtllihfireqqnltgahigcdtshcgactvdldgmsvk
sctmfavqangasittiegmaapdgtlsalqegfrmmhglqcgyctpgmimrshrllqen
pspteaeirfgiggnlcrctgyqnivkaiqyaaakingvpfeeaae

    Sequence, based on observed residues (ATOM records): (download) 
    >1n5wA (A:)
kahieltinghpvealveprtllihfireqqnltgahigcdtshcgactvdldgmsvksc
tmfavqangasittiegmaapdgtlsalqegfrmmhglqcgyctpgmimrshrllqenps
pteaeirfgiggnlcrctgyqnivkaiqyaaakingvpfee

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1n5wB (B:)
mniqttveptsaeraeklqgmgckrkrvedirftqgkgnyvddvklpgmlfgdfvrssha
hariksidtskakalpgvfavltaadlkplnlhymptlagdvqavladekvlfqnqevaf
vvakdryvaadaielvevdyeplpvlvdpfkamepdapllredikdkmtgahgarkhhnh
ifrweigdkegtdatfakaevvskdmftyhrvhpspletcqcvasmdkikgeltlwgtfq
aphvirtvvslisglpehkihviapdigggfgnkvgaysgyvcavvasivlgvpvkwved
rmenlsttsfardyhmttelaatkdgkilamrchvladhgafdacadpskwpagfmnict
gsydmpvahlavdgvytnkasggvayrcsfrvteavyaieraietlaqrlemdsadlrik
nfiqpeqfpymaplgweydsgnyplamkkamdtvgyhqlraeqkakqeafkrgetreimg
igisffteivgagpskncdilgvsmfdsaeirihptgsviarmgtksqgqghettyaqii
atelgipaddimieegntdtapyglgtygsrstptagaatavaarkikakaqmiaahmle
vhegdlewdvdrfrvkglpekfktmkelawasynspppnlepgleavnyydppnmtypfg
ayfcimdidvdtgvaktrrfyalddcgtrinpmiiegqvhgglteafavamgqeirydeq
gnvlgasfmdfflptavetpkwetdytvtpsphhpigakgvgesphvggvpcfsnavnda
yaflnaghiqmphdawrlwkvgeqlglhv

    Sequence, based on observed residues (ATOM records): (download) 
    >1n5wB (B:)
tveptsaeraeklqgmgckrkrvedirftqgkgnyvddvklpgmlfgdfvrsshaharik
sidtskakalpgvfavltaadlkplnlhymptlagdvqavladekvlfqnqevafvvakd
ryvaadaielvevdyeplpvlvdpfkamepdapllredikdkmtgahgarkhhnhifrwe
igdkegtdatfakaevvskdmftyhrvhpspletcqcvasmdkikgeltlwgtfqaphvi
rtvvslisglpehkihviapdigggfgnkvgaysgyvcavvasivlgvpvkwvedrmenl
sttsfardyhmttelaatkdgkilamrchvladhgafdacadpskwpagfmnictgsydm
pvahlavdgvytnkasggvayrcsfrvteavyaieraietlaqrlemdsadlriknfiqp
eqfpymaplgweydsgnyplamkkamdtvgyhqlraeqkakqeafkrgetreimgigisf
fteivgagpskncdilgvsmfdsaeirihptgsviarmgtksqgqghettyaqiiatelg
ipaddimieegntdtapyglgtygsrstptagaatavaarkikakaqmiaahmlevhegd
lewdvdrfrvkglpekfktmkelawasynspppnlepgleavnyydppnmtypfgayfci
mdidvdtgvaktrrfyalddcgtrinpmiiegqvhgglteafavamgqeirydeqgnvlg
asfmdfflptavetpkwetdytvtpsphhpigakgvgesphvggvpcfsnavndayafln
aghiqmphdawrlwkvgeqlglhv

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1n5wC (C:)
mipgsfdyhrpksiadavalltklgedarplagghslipimktrlatpehlvdlrdigdl
vgireegtdvvigamttqhaligsdflaaklpiiretslliadpqirymgtiggnaangd
pgndmpalmqclgaayeltgpegarivaardyyqgayftaiepgelltairipvpptghg
yayeklkrkigdyataaaavvltmsggkcvtasigltnvantplwaeeagkvlvgtaldk
paldkavalaeaitapasdgrgpaeyrtkmagvmlrraverakarakn

    Sequence, based on observed residues (ATOM records): (download) 
    >1n5wC (C:)
mipgsfdyhrpksiadavalltklgedarplagghslipimktrlatpehlvdlrdigdl
vgireegtdvvigamttqhaligsdflaaklpiiretslliadpqirymgtiggnaangd
pgndmpalmqclgaayeltgpegarivaardyyqgayftaiepgelltairipvpptghg
yayeklkrkigdyataaaavvltmsggkcvtasigltnvantplwaeeagkvlvgtaldk
paldkavalaeaitapasdgrgpaeyrtkmagvmlrraverakarak

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1n5wD (D:)
makahieltinghpvealveprtllihfireqqnltgahigcdtshcgactvdldgmsvk
sctmfavqangasittiegmaapdgtlsalqegfrmmhglqcgyctpgmimrshrllqen
pspteaeirfgiggnlcrctgyqnivkaiqyaaakingvpfeeaae

    Sequence, based on observed residues (ATOM records): (download) 
    >1n5wD (D:)
kahieltinghpvealveprtllihfireqqnltgahigcdtshcgactvdldgmsvksc
tmfavqangasittiegmaapdgtlsalqegfrmmhglqcgyctpgmimrshrllqenps
pteaeirfgiggnlcrctgyqnivkaiqyaaakingvp

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >1n5wE (E:)
mniqttveptsaeraeklqgmgckrkrvedirftqgkgnyvddvklpgmlfgdfvrssha
hariksidtskakalpgvfavltaadlkplnlhymptlagdvqavladekvlfqnqevaf
vvakdryvaadaielvevdyeplpvlvdpfkamepdapllredikdkmtgahgarkhhnh
ifrweigdkegtdatfakaevvskdmftyhrvhpspletcqcvasmdkikgeltlwgtfq
aphvirtvvslisglpehkihviapdigggfgnkvgaysgyvcavvasivlgvpvkwved
rmenlsttsfardyhmttelaatkdgkilamrchvladhgafdacadpskwpagfmnict
gsydmpvahlavdgvytnkasggvayrcsfrvteavyaieraietlaqrlemdsadlrik
nfiqpeqfpymaplgweydsgnyplamkkamdtvgyhqlraeqkakqeafkrgetreimg
igisffteivgagpskncdilgvsmfdsaeirihptgsviarmgtksqgqghettyaqii
atelgipaddimieegntdtapyglgtygsrstptagaatavaarkikakaqmiaahmle
vhegdlewdvdrfrvkglpekfktmkelawasynspppnlepgleavnyydppnmtypfg
ayfcimdidvdtgvaktrrfyalddcgtrinpmiiegqvhgglteafavamgqeirydeq
gnvlgasfmdfflptavetpkwetdytvtpsphhpigakgvgesphvggvpcfsnavnda
yaflnaghiqmphdawrlwkvgeqlglhv

    Sequence, based on observed residues (ATOM records): (download) 
    >1n5wE (E:)
aeklqgmgckrkrvedirftqgkgnyvddvklpgmlfgdfvrsshahariksidtskaka
lpgvfavltaadlkplnlhymptlagdvqavladekvlfqnqevafvvakdryvaadaie
lvevdyeplpvlvdpfkamepdapllredikdkmtgahgarkhhnhifrweigdkegtda
tfakaevvskdmftyhrvhpspletcqcvasmdkikgeltlwgtfqaphvirtvvslisg
lpehkihviapdigggfgnkvgaysgyvcavvasivlgvpvkwvedrmenlsttsfardy
hmttelaatkdgkilamrchvladhgafdacadpskwpagfmnictgsydmpvahlavdg
vytnkasggvayrcsfrvteavyaieraietlaqrlemdsadlriknfiqpeqfpymapl
gweydsgnyplamkkamdtvgyhqlraeqkakqeafkrgetreimgigisffteivgagp
skncdilgvsmfdsaeirihptgsviarmgtksqgqghettyaqiiatelgipaddimie
egntdtapyglgtygsrstptagaatavaarkikakaqmiaahmlevhegdlewdvdrfr
vkglpekfktmkelawasynspppnlepgleavnyydppnmtypfgayfcimdidvdtgv
aktrrfyalddcgtrinpmiiegqvhgglteafavamgqeirydeqgnvlgasfmdfflp
tavetpkwetdytvtpsphhpigakgvgesphvggvpcfsnavndayaflnaghiqmphd
awrlwkvgeqlglhv

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >1n5wF (F:)
mipgsfdyhrpksiadavalltklgedarplagghslipimktrlatpehlvdlrdigdl
vgireegtdvvigamttqhaligsdflaaklpiiretslliadpqirymgtiggnaangd
pgndmpalmqclgaayeltgpegarivaardyyqgayftaiepgelltairipvpptghg
yayeklkrkigdyataaaavvltmsggkcvtasigltnvantplwaeeagkvlvgtaldk
paldkavalaeaitapasdgrgpaeyrtkmagvmlrraverakarakn

    Sequence, based on observed residues (ATOM records): (download) 
    >1n5wF (F:)
mipgsfdyhrpksiadavalltklgedarplagghslipimktrlatpehlvdlrdigdl
vgireegtdvvigamttqhaligsdflaaklpiiretslliadpqirymgtiggnaangd
pgndmpalmqclgaayeltgpegarivaardyyqgayftaiepgelltairipvpptghg
yayeklkrkigdyataaaavvltmsggkcvtasigltnvantplwaeeagkvlvgtaldk
paldkavalaeaitapasdgrgpaeyrtkmagvmlrraverakara