PDB entry 1muj
View 1muj on RCSB PDB site
Description: Crystal structure of murine class II MHC I-Ab in complex with a human CLIP peptide
Class: immune system
Keywords: I-ab, clip, complex, antigen, immune system
Deposited on
2002-09-23, released
2003-02-18
The last revision prior to the SCOPe 2.07 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-25.
Experiment type: XRAY
Resolution: 2.15 Å
R-factor: 0.22
AEROSPACI score: 0.37
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: H-2 class II histocompatibility antigen, A-B alpha chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- Uniprot P14434 (Start-181)
- cloning artifact (182-186)
Domains in SCOPe 2.07: d1muja1, d1muja2, d1muja3 - Chain 'B':
Compound: H-2 class II histocompatibility antigen, A beta chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- Uniprot P14483 (Start-188)
- cloning artifact (189-192)
Domains in SCOPe 2.07: d1mujb1, d1mujb2, d1mujb3 - Chain 'C':
Compound: CLIP peptide
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Heterogens: NAG, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1mujA (A:)
eddieadhvgtygisvyqspgdigqytfefdgdelfyvdldkketvwmlpefgqlasfdp
qgglqniavvkhnlgvltkrsnstpatneapqatvfpkspvllgqpntlicfvdnifppv
initwlrnsksvadgvyetsffvnrdysfhklsyltfipsdddiydckvehwgleepvlk
hwssadlvpr
Sequence, based on observed residues (ATOM records): (download)
>1mujA (A:)
dieadhvgtygisvyqspgdigqytfefdgdelfyvdldkketvwmlpefgqlasfdpqg
glqniavvkhnlgvltkrsnstpatneapqatvfpkspvllgqpntlicfvdnifppvin
itwlrnsksvadgvyetsffvnrdysfhklsyltfipsdddiydckvehwgleepvlkhw
ssadl
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1mujB (B:)
gdserhfvyqfmgecyftngtqriryvtryiynreeyvrydsdvgehravtelgrpdaey
wnsqpeilertraeldtvcrhnyegpethtslrrleqpnvvislsrtealnhhntlvcsv
tdfypakikvrwfrngqeetvgvsstqlirngdwtfqvlvmlemtprrgevytchvehps
lkspitvewssaelvpr
Sequence, based on observed residues (ATOM records): (download)
>1mujB (B:)
serhfvyqfmgecyftngtqriryvtryiynreeyvrydsdvgehravtelgrpdaeywn
sqpeilertraeldtvcrhnyegpethtslrrleqpnvvislshntlvcsvtdfypakik
vrwfrngqeetvgvsstqlirngdwtfqvlvmlemtprrgevytchvehpslkspitvew
ssae
- Chain 'C':
No sequence available.