PDB entry 1mky

View 1mky on RCSB PDB site
Description: Structural Analysis of the Domain Interactions in Der, a Switch Protein Containing Two GTPase Domains
Class: ligand binding protein
Keywords: GTPase, EngA, Der, KH-Domain, tandem G-domains, LIGAND BINDING PROTEIN
Deposited on 2002-08-29, released 2003-01-14
The last revision prior to the SCOPe 2.05 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.204
AEROSPACI score: 0.47 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Probable GTP-binding protein engA
    Species: Thermotoga maritima [TaxId:2336]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9X1F8 (Start-438)
      • cloning artifact (70)
      • cloning artifact (77)
      • cloning artifact (155)
      • cloning artifact (283)
      • cloning artifact (287)
      • conflict (305)
      • cloning artifact (344)
      • cloning artifact (348)
      • conflict (387)
    Domains in SCOPe 2.05: d1mkya1, d1mkya2, d1mkya3
  • Heterogens: PO4, GDP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1mkyA (A:)
matvlivgrpnvgkstlfnklvkkkkaivedeegvtrdpvqdtvewygktfklvdtcgvf
dnpqdiisqkmkevtlnmireadlvlfvvdgkrgitkedesladflrkstvdtilvanka
enlreferevkpelyslgfgepipvsaehninldtmletiikkleekgldleskpeitda
ikvaivgrpnvgkstlfnailnkeralvspipgttrdpvddevfidgrkyvfvdtaglrr
ksrveprtvekysnyrvvdsiekadvvvivldatqgitrqdqrmaglmerrgrasvvvfn
kwdlvvhrekrydeftklfreklyfidyspliftsadkgwnidrmidamnlayasyttkv
pssainsalqkvlaftnlprglkiffgvqvdikpptflffvnsiekvknpqkiflrklir
dyvfpfegspiflkfkrsr

    Sequence, based on observed residues (ATOM records): (download) 
    >1mkyA (A:)
atvlivgrpnvgkstlfnklvkdpvqdtvewygktfklvdtcgvfdnpqdiisqkmkevt
lnmireadlvlfvvdgkrgitkedesladflrkstvdtilvankaenlreferevkpely
slgfgepipvsaehninldtmletiikkleekgldleskpeitdaikvaivgrpnvgkst
lfnailnkeralvspipvddevfidgrkyvfvdtaglekysnyrvvdsiekadvvvivld
atqgitrqdqrmaglmerrgrasvvvfnkwdlvvhrekrydeftklfreklyfidyspli
ftsadkgwnidrmidamnlayasyttkvpssainsalqkvlaftnlprglkiffgvqvdi
kpptflffvnsiekvknpqkiflrklirdyvfpfegspiflkfkrsr