PDB entry 1mel

View 1mel on RCSB PDB site
Description: crystal structure of a camel single-domain vh antibody fragment in complex with lysozyme
Class: complex (antibody/antigen)
Keywords: camel single-domain anti-lysozyme, complex (antibody/antigen)
Deposited on 1996-06-06, released 1997-06-16
The last revision prior to the SCOP 1.73 freeze date was dated 2003-04-01, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.221
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Vh Single-Domain Antibody
    Species: CAMELUS DROMEDARIUS
    Gene: ANTIBODY VH FRAGMENT CAB-LYS3
    Domains in SCOP 1.73: d1mela_
  • Chain 'B':
    Compound: Vh Single-Domain Antibody
    Species: CAMELUS DROMEDARIUS
    Gene: ANTIBODY VH FRAGMENT CAB-LYS3
    Domains in SCOP 1.73: d1melb_
  • Chain 'L':
    Compound: lysozyme
    Species: GALLUS GALLUS
    Gene: ANTIBODY VH FRAGMENT CAB-LYS3
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1mell_
  • Chain 'M':
    Compound: lysozyme
    Species: GALLUS GALLUS
    Gene: ANTIBODY VH FRAGMENT CAB-LYS3
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1melm_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >1melA (A:)
    dvqlqasgggsvqaggslrlscaasgytigpycmgwfrqapgkeregvaainmgggityy
    adsvkgrftisqdnakntvyllmnslepedtaiyycaadstiyasyyecghglstggygy
    dswgqgtqvtvssgrypydvpdygsgra
    

    Sequence, based on observed residues (ATOM records): (download)
    >1melA (A:)
    vqlqasgggsvqaggslrlscaasgytigpycmgwfrqapgkeregvaainmgggityya
    dsvkgrftisqdnakntvyllmnslepedtaiyycaadstiyasyyecghglstggygyd
    swgqgtqvtvss
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >1melB (B:)
    dvqlqasgggsvqaggslrlscaasgytigpycmgwfrqapgkeregvaainmgggityy
    adsvkgrftisqdnakntvyllmnslepedtaiyycaadstiyasyyecghglstggygy
    dswgqgtqvtvssgrypydvpdygsgra
    

    Sequence, based on observed residues (ATOM records): (download)
    >1melB (B:)
    vqlqasgggsvqaggslrlscaasgytigpycmgwfrqapgkeregvaainmgggityya
    dsvkgrftisqdnakntvyllmnslepedtaiyycaadstiyasyyecghglstggygyd
    swgqgtqvtvss
    

  • Chain 'L':
    Sequence, based on SEQRES records: (download)
    >1melL (L:)
    kvfgrcelaaamkrhgldnyrgyslgnwvcaakfesnfntqatnrntdgstdygilqins
    rwwcndgrtpgsrnlcnipcsallssditasvncakkivsdgngmnawvawrnrckgtdv
    qawirgcrl
    

    Sequence, based on observed residues (ATOM records): (download)
    >1melL (L:)
    kvfgrcelaaamkrhgldnyrgyslgnwvcaakfesnfntqatnrntdgstdygilqins
    rwwcndgrtpgsrnlcnipcsallssditasvncakkivsdgngmnawvawrnrckgtdv
    qawirgc
    

  • Chain 'M':
    Sequence, based on SEQRES records: (download)
    >1melM (M:)
    kvfgrcelaaamkrhgldnyrgyslgnwvcaakfesnfntqatnrntdgstdygilqins
    rwwcndgrtpgsrnlcnipcsallssditasvncakkivsdgngmnawvawrnrckgtdv
    qawirgcrl
    

    Sequence, based on observed residues (ATOM records): (download)
    >1melM (M:)
    kvfgrcelaaamkrhgldnyrgyslgnwvcaakfesnfntqatnrntdgstdygilqins
    rwwcndgrtpgsrnlcnipcsallssditasvncakkivsdgngmnawvawrnrckgtdv
    qawirgc