PDB entry 1mdt

View 1mdt on RCSB PDB site
Description: the refined structure of monomeric diphtheria toxin at 2.3 angstroms resolution
Class: toxin
Keywords: toxin
Deposited on 1994-03-21, released 1994-07-31
The last revision prior to the SCOPe 2.07 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.207
AEROSPACI score: 0.34 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: diphtheria toxin
    Species: Corynephage beta [TaxId:10703]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1mdta1, d1mdta2, d1mdta3
  • Chain 'B':
    Compound: diphtheria toxin
    Species: Corynephage beta [TaxId:10703]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1mdtb1, d1mdtb2, d1mdtb3
  • Heterogens: APU, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1mdtA (A:)
gaddvvdssksfvmenfssyhgtkpgyvdsiqkgiqkpksgtqgnydddwkgfystdnky
daagysvdnenplsgkaggvvkvtypgltkvlalkvdnaetikkelglslteplmeqvgt
eefikrfgdgasrvvlslpfaegsssveyinnweqakalsveleinfetrgkrgqdamye
ymaqacagnrvrrsvgsslscinldwdvirdktktkieslkehgpiknkmsespnktvse
ekakqyleefhqtalehpelselktvtgtnpvfaganyaawavnvaqvidsetadnlekt
taalsilpgigsvmgiadgavhhnteeivaqsialsslmvaqaiplvgelvdigfaaynf
vesiinlfqvvhnsynrpayspghktqpflhdgyavswntvedsiirtgfqgesghdiki
taentplpiagvllptipgkldvnkskthisvngrkirmrcraidgdvtfcrpkspvyvg
ngvhanlhvafhrsssekihsneissdsigvlgyqktvdhtkvnsklslffeiks

    Sequence, based on observed residues (ATOM records): (download) 
    >1mdtA (A:)
gaddvvdssksfvmenfssyhgtkpgyvdsiqkgiqkpksgtqgnydddwkgfystdnky
daagysvdnenplsgkaggvvkvtypgltkvlalkvdnaetikkelglslteplmeqvgt
eefikrfgdgasrvvlslpfaegsssveyinnweqakalsveleinfetrgkrgqdamye
ymaqacascinldwdvirdktktkieslkehgpiknkmsespnktvseekakqyleefhq
talehpelselktvtgtnpvfaganyaawavnvaqvidsetadnlekttaalsilpgigs
vmgiadgavhhnteeivaqsialsslmvaqaiplvgelvdigfaaynfvesiinlfqvvh
nsynrpayspghktqpflhdgyavswntvedsiirtgfqgesghdikitaentplpiagv
llptipgkldvnkskthisvngrkirmrcraidgdvtfcrpkspvyvgngvhanlhvafh
rsssekihsneissdsigvlgyqktvdhtkvnsklslffeiks

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1mdtB (B:)
gaddvvdssksfvmenfssyhgtkpgyvdsiqkgiqkpksgtqgnydddwkgfystdnky
daagysvdnenplsgkaggvvkvtypgltkvlalkvdnaetikkelglslteplmeqvgt
eefikrfgdgasrvvlslpfaegsssveyinnweqakalsveleinfetrgkrgqdamye
ymaqacagnrvrrsvgsslscinldwdvirdktktkieslkehgpiknkmsespnktvse
ekakqyleefhqtalehpelselktvtgtnpvfaganyaawavnvaqvidsetadnlekt
taalsilpgigsvmgiadgavhhnteeivaqsialsslmvaqaiplvgelvdigfaaynf
vesiinlfqvvhnsynrpayspghktqpflhdgyavswntvedsiirtgfqgesghdiki
taentplpiagvllptipgkldvnkskthisvngrkirmrcraidgdvtfcrpkspvyvg
ngvhanlhvafhrsssekihsneissdsigvlgyqktvdhtkvnsklslffeiks

    Sequence, based on observed residues (ATOM records): (download) 
    >1mdtB (B:)
gaddvvdssksfvmenfssyhgtkpgyvdsiqkgiqkpksgtqgnydddwkgfystdnky
daagysvdnenplsgkaggvvkvtypgltkvlalkvdnaetikkelglslteplmeqvgt
eefikrfgdgasrvvlslpfaegsssveyinnweqakalsveleinfetrgkrgqdamye
ymaqacascinldwdvirdktktkieslkehgpiknkmsespnktvseekakqyleefhq
talehpelselktvtgtnpvfaganyaawavnvaqvidsetadnlekttaalsilpgigs
vmgiadgavhhnteeivaqsialsslmvaqaiplvgelvdigfaaynfvesiinlfqvvh
nsynrpayspghktqpflhdgyavswntvedsiirtgfqgesghdikitaentplpiagv
llptipgkldvnkskthisvngrkirmrcraidgdvtfcrpkspvyvgngvhanlhvafh
rsssekihsneissdsigvlgyqktvdhtkvnsklslffeiks