PDB entry 1m3q
View 1m3q on RCSB PDB site
Description: Crystal Structure of hogg1 D268E Mutant with Base-Excised DNA and 8-aminoguanine
Class: hydrolase/DNA
Keywords: 8-oxoguanine, DNA glycosylase, DNA repair, end product, hogg, 8-aminoguanine, re-ligation, HYDROLASE/DNA COMPLEX
Deposited on
2002-06-28, released
2004-02-17
The last revision prior to the SCOPe 2.08 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.235
AEROSPACI score: 0.41
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: 8-oxoguanine DNA glycosylase
Species: Homo sapiens [TaxId:9606]
Gene: OGG1
Database cross-references and differences (RAF-indexed):
- Uniprot O15527 (3-316)
- cloning artifact (0-2)
- engineered (259)
Domains in SCOPe 2.08: d1m3qa1, d1m3qa2, d1m3qa3 - Chain 'B':
Compound: 5'-d(*gp*gp*tp*ap*gp*ap*cp*cp*tp*gp*gp*ap*cp*gp*c)-3'
- Chain 'C':
Compound: 5'-d(*gp*cp*gp*tp*cp*cp*ap*(drz)p*gp*tp*cp*tp*ap*cp*c)-3'
- Heterogens: CA, ANG, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1m3qA (A:)
gseghrtlastpalwasipcprselrldlvlpsgqsfrwreqspahwsgvladqvwtltq
teeqlhctvyrgdksqasrptpdeleavrkyfqldvtlaqlyhhwgsvdshfqevaqkfq
gvrllrqdpieclfsficssnnniaritgmverlcqafgprliqlddvtyhgfpslqala
gpeveahlrklglgyraryvsasaraileeqgglawlqqlressyeeahkalcilpgvgt
kvadciclmaldkpqavpvevhmwhiaqrdyswhpttsqakgpspqtnkelgnffrslwg
pyagwaqavlfsadlrq
Sequence, based on observed residues (ATOM records): (download)
>1m3qA (A:)
gseghrtlastpalwasipcprselrldlvlpsgqsfrwreqspahwsgvladqvwtltq
teeqlhctvyrsqasrptpdeleavrkyfqldvtlaqlyhhwgsvdshfqevaqkfqgvr
llrqdpieclfsficssnnniaritgmverlcqafgprliqlddvtyhgfpslqalagpe
veahlrklglgyraryvsasaraileeqgglawlqqlressyeeahkalcilpgvgtkva
dciclmaldkpqavpvevhmwhiaqrdyswhpttsqakgpspqtnkelgnffrslwgpya
gwaqavlfsadlrq
- Chain 'B':
No sequence available.
- Chain 'C':
No sequence available.