PDB entry 1lt9

View 1lt9 on RCSB PDB site
Description: Crystal Structure of Recombinant Human Fibrinogen Fragment D
Class: blood clotting
Keywords: blood coagulation, fibrinogen, fibrinogen fragment D, recombinant fibrinogen fragment D, recombinant fibrinogen, BLOOD CLOTTING
Deposited on 2002-05-20, released 2002-11-06
The last revision prior to the SCOPe 2.06 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-25.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.224
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Fibrinogen alpha/alpha-E Chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1lt9a_
  • Chain 'B':
    Compound: fibrinogen beta chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1lt9b1, d1lt9b2
  • Chain 'C':
    Compound: Fibrinogen gamma chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1lt9c1, d1lt9c2
  • Chain 'D':
    Compound: Fibrinogen alpha/alpha-E Chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1lt9d_
  • Chain 'E':
    Compound: fibrinogen beta chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1lt9e1, d1lt9e2
  • Chain 'F':
    Compound: Fibrinogen gamma chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1lt9f1, d1lt9f2
  • Heterogens: NAG, CA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >1lt9A (A:)
    viekvqhiqllqknvraqlvdmkrlevdidikirscrgscsralarevdlkdyedqqkql
    eqviak
    

    Sequence, based on observed residues (ATOM records): (download)
    >1lt9A (A:)
    viekvqhiqllqknvraqlvdmkrlevdidikirscrgscsralarevdlkdyedqqkql
    eqvia
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >1lt9B (B:)
    hqlyidetvnsniptnlrvlrsilenlrskiqklesdvsaqmeycrtpctvscnipvvsg
    keceeiirkggetsemyliqpdssvkpyrvycdmntenggwtviqnrqdgsvdfgrkwdp
    ykqgfgnvatntdgknycglpgeywlgndkisqltrmgptelliemedwkgdkvkahygg
    ftvqneankyqisvnkyrgtagnalmdgasqlmgenrtmtihngmffstydrdndgwlts
    dprkqcskedgggwwynrchaanpngryywggqytwdmakhgtddgvvwmnwkgswysmr
    kmsmkirpffpqq
    

    Sequence, based on observed residues (ATOM records): (download)
    >1lt9B (B:)
    iptnlrvlrsilenlrskiqklesdvsaqmeycrtpctvscnipvvsgkeceeiirkgge
    tsemyliqpdssvkpyrvycdmntenggwtviqnrqdgsvdfgrkwdpykqgfgnvatnt
    dgknycglpgeywlgndkisqltrmgptelliemedwkgdkvkahyggftvqneankyqi
    svnkyrgtagnalmdgasqlmgenrtmtihngmffstydrdndgwltsdprkqcskedgg
    gwwynrchaanpngryywggqytwdmakhgtddgvvwmnwkgswysmrkmsmkirpff
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >1lt9C (C:)
    yeasilthdssirylqeiynsnnqkivnlkekvaqleaqcqepckdtvqihditgkdcqd
    iankgakqsglyfikplkanqqflvyceidgsgngwtvfqkrldgsvdfkknwiqykegf
    ghlsptgttefwlgnekihlistqsaipyalrveledwngrtstadyamfkvgpeadkyr
    ltyayfaggdagdafdgfdfgddpsdkfftshngmqfstwdndndkfegncaeqdgsgww
    mnkchaghlngvyyqggtyskastpngydngiiwatwktrwysmkkttmkiipfnrltig
    egqqhhlggak
    

    Sequence, based on observed residues (ATOM records): (download)
    >1lt9C (C:)
    yeasilthdssirylqeiynsnnqkivnlkekvaqleaqcqepckdtvqihditgkdcqd
    iankgakqsglyfikplkanqqflvyceidgsgngwtvfqkrldgsvdfkknwiqykegf
    ghlsptgttefwlgnekihlistqsaipyalrveledwngrtstadyamfkvgpeadkyr
    ltyayfaggdagdafdgfdfgddpsdkfftshngmqfstwdndndkfegncaeqdgsgww
    mnkchaghlngvyyqggtyskastpngydngiiwatwktrwysmkkttmkiipfnrlti
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >1lt9D (D:)
    viekvqhiqllqknvraqlvdmkrlevdidikirscrgscsralarevdlkdyedqqkql
    eqviak
    

    Sequence, based on observed residues (ATOM records): (download)
    >1lt9D (D:)
    iqllqknvraqlvdmkrlevdidikirscrgscsralarevdlkdyedqqkqleqvia
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >1lt9E (E:)
    hqlyidetvnsniptnlrvlrsilenlrskiqklesdvsaqmeycrtpctvscnipvvsg
    keceeiirkggetsemyliqpdssvkpyrvycdmntenggwtviqnrqdgsvdfgrkwdp
    ykqgfgnvatntdgknycglpgeywlgndkisqltrmgptelliemedwkgdkvkahygg
    ftvqneankyqisvnkyrgtagnalmdgasqlmgenrtmtihngmffstydrdndgwlts
    dprkqcskedgggwwynrchaanpngryywggqytwdmakhgtddgvvwmnwkgswysmr
    kmsmkirpffpqq
    

    Sequence, based on observed residues (ATOM records): (download)
    >1lt9E (E:)
    lrvlrsilenlrskiqklesdvsaqmeycrtpctvscnipvvsgkeceeiirkggetsem
    yliqpdssvkpyrvycdmntenggwtviqnrqdgsvdfgrkwdpykqgfgnvatntdgkn
    ycglpgeywlgndkisqltrmgptelliemedwkgdkvkahyggftvqneankyqisvnk
    yrgtagnalmdgasqlmgenrtmtihngmffstydrdndgwltsdprkqcskedgggwwy
    nrchaanpngryywggqytwdmakhgtddgvvwmnwkgswysmrkmsmkirpff
    

  • Chain 'F':
    Sequence, based on SEQRES records: (download)
    >1lt9F (F:)
    yeasilthdssirylqeiynsnnqkivnlkekvaqleaqcqepckdtvqihditgkdcqd
    iankgakqsglyfikplkanqqflvyceidgsgngwtvfqkrldgsvdfkknwiqykegf
    ghlsptgttefwlgnekihlistqsaipyalrveledwngrtstadyamfkvgpeadkyr
    ltyayfaggdagdafdgfdfgddpsdkfftshngmqfstwdndndkfegncaeqdgsgww
    mnkchaghlngvyyqggtyskastpngydngiiwatwktrwysmkkttmkiipfnrltig
    egqqhhlggak
    

    Sequence, based on observed residues (ATOM records): (download)
    >1lt9F (F:)
    lqeiynsnnqkivnlkekvaqleaqcqepckdtvqihditgkdcqdiankgakqsglyfi
    kplkanqqflvyceidgsgngwtvfqkrldgsvdfkknwiqykegfghlsptgttefwlg
    nekihlistqsaipyalrveledwngrtstadyamfkvgpeadkyrltyayfaggdagda
    fdgfdfgddpsdkfftshngmqfstwdndndkfegncaeqdgsgwwmnkchaghlngvyy
    qggtyskastpngydngiiwatwktrwysmkkttmkiipfnrlti