PDB entry 1lqv

View 1lqv on RCSB PDB site
Description: Crystal structure of the Endothelial protein C receptor with phospholipid in the groove in complex with Gla domain of protein C.
Class: blood clotting
Keywords: Gla (gamma-carboxyglutamic acid) residues, phospholipid binding groove, Ca ion binding, BLOOD CLOTTING
Deposited on 2002-05-13, released 2002-06-19
The last revision prior to the SCOPe 2.07 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-25.
Experiment type: XRAY
Resolution: 1.6 Å
R-factor: 0.189
AEROSPACI score: 0.58 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Endothelial protein C receptor
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1lqva_
  • Chain 'B':
    Compound: Endothelial protein C receptor
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1lqvb_
  • Chain 'C':
    Compound: Vitamin-K dependent protein C
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P04070 (0-32)
      • modified residue (5-6)
      • modified residue (13)
      • modified residue (15)
      • modified residue (18-19)
      • modified residue (24-25)
      • modified residue (28)
    Domains in SCOPe 2.07: d1lqvc_
  • Chain 'D':
    Compound: Vitamin-K dependent protein C
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P04070 (0-32)
      • modified residue (5-6)
      • modified residue (13)
      • modified residue (15)
      • modified residue (18-19)
      • modified residue (24-25)
      • modified residue (28)
    Domains in SCOPe 2.07: d1lqvd_
  • Heterogens: NAG, NDG, CA, PTY, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1lqvA (A:)
sqdasdglqrlhmlqisyfrdpyhvwyqgnaslgghlthvlegpdtnttiiqlqplqepe
swartqsglqsyllqfhglvrlvhqertlafpltircflgcelppegsrahvffevavng
ssfvsfrperalwqadtqvtsgvvtftlqqlnaynrtryelrefledtcvqyvqkhisae
ntkgsqtsrsyts

    Sequence, based on observed residues (ATOM records): (download) 
    >1lqvA (A:)
glqrlhmlqisyfrdpyhvwyqgnaslgghlthvlegpdtnttiiqlqplqepeswartq
sglqsyllqfhglvrlvhqertlafpltircflgcelppegsrahvffevavngssfvsf
rperalwqadtqvtsgvvtftlqqlnaynrtryelrefledtcvqyvqkhis

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1lqvB (B:)
sqdasdglqrlhmlqisyfrdpyhvwyqgnaslgghlthvlegpdtnttiiqlqplqepe
swartqsglqsyllqfhglvrlvhqertlafpltircflgcelppegsrahvffevavng
ssfvsfrperalwqadtqvtsgvvtftlqqlnaynrtryelrefledtcvqyvqkhisae
ntkgsqtsrsyts

    Sequence, based on observed residues (ATOM records): (download) 
    >1lqvB (B:)
lqrlhmlqisyfrdpyhvwyqgnaslgghlthvlegpdtnttiiqlqplqepeswartqs
glqsyllqfhglvrlvhqertlafpltircflgcelppegsrahvffevavngssfvsfr
peralwqadtqvtsgvvtftlqqlnaynrtryelrefledtcvqyvqkhisae

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1lqvC (C:)
ansfleelrhsslerecieeicdfeeakeifqn

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1lqvD (D:)
ansfleelrhsslerecieeicdfeeakeifqn