PDB entry 1lq1

View 1lq1 on RCSB PDB site
Description: DNA Complexed Structure of the Key Transcription Factor Initiating Development in Sporulation Bacteria
Class: transcription/DNA
Keywords: Spo0A, transcriptional activation and repression, 0A box, DNA complexed structure, TRANSCRIPTION/DNA COMPLEX
Deposited on 2002-05-08, released 2002-08-23
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.217
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: stage 0 sporulation protein a
    Species: Bacillus subtilis [TaxId:1423]
    Gene: SPO0A
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1lq1a_
  • Chain 'B':
    Compound: stage 0 sporulation protein a
    Species: Bacillus subtilis [TaxId:1423]
    Gene: SPO0A
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1lq1b_
  • Chain 'C':
    Compound: stage 0 sporulation protein a
    Species: Bacillus subtilis [TaxId:1423]
    Gene: SPO0A
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1lq1c_
  • Chain 'D':
    Compound: stage 0 sporulation protein a
    Species: Bacillus subtilis [TaxId:1423]
    Gene: SPO0A
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1lq1d_
  • Chain 'E':
    Compound: 5'-d(*tp*tp*cp*gp*tp*gp*tp*cp*gp*ap*ap*tp*tp*tp*tp*g)-3'
  • Chain 'F':
    Compound: 5'-d(*ap*cp*ap*ap*ap*ap*tp*tp*cp*gp*ap*cp*ap*cp*gp*a)-3'
  • Chain 'G':
    Compound: 5'-d(*tp*tp*cp*gp*tp*gp*tp*cp*gp*ap*ap*tp*tp*tp*tp*g)-3'
  • Chain 'H':
    Compound: 5'-d(*ap*cp*ap*ap*ap*ap*tp*tp*cp*gp*ap*cp*ap*cp*gp*a)-3'
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1lq1A (A:)
pkkknldasitsiiheigvpahikgylylreaismvyndiellgsitkvlypdiakkfnt
tasrverairhaievawsrgnidsisslfgytvsmtkakptnsefiamvadklrlehkas

    Sequence, based on observed residues (ATOM records): (download) 
    >1lq1A (A:)
kknldasitsiiheigvpahikgylylreaismvyndiellgsitkvlypdiakkfntta
srverairhaievawsrgnidsisslfakptnsefiamvadklrleh

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1lq1B (B:)
pkkknldasitsiiheigvpahikgylylreaismvyndiellgsitkvlypdiakkfnt
tasrverairhaievawsrgnidsisslfgytvsmtkakptnsefiamvadklrlehkas

    Sequence, based on observed residues (ATOM records): (download) 
    >1lq1B (B:)
nldasitsiiheigvpahikgylylreaismvyndiellgsitkvlypdiakkfnttasr
verairhaievawsrgnidsisslfakptnsefiamvadklrl

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1lq1C (C:)
pkkknldasitsiiheigvpahikgylylreaismvyndiellgsitkvlypdiakkfnt
tasrverairhaievawsrgnidsisslfgytvsmtkakptnsefiamvadklrlehkas

    Sequence, based on observed residues (ATOM records): (download) 
    >1lq1C (C:)
knldasitsiiheigvpahikgylylreaismvyndiellgsitkvlypdiakkfnttas
rverairhaievawsrgnidsisslfgytkakptnsefiamvadklrlehka

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1lq1D (D:)
pkkknldasitsiiheigvpahikgylylreaismvyndiellgsitkvlypdiakkfnt
tasrverairhaievawsrgnidsisslfgytvsmtkakptnsefiamvadklrlehkas

    Sequence, based on observed residues (ATOM records): (download) 
    >1lq1D (D:)
knldasitsiiheigvpahikgylylreaismvyndiellgsitkvlypdiakkfnttas
rverairhaievawsrgnidsisslfkakptnsefiamvadklrleh

  • Chain 'E':
    No sequence available.

  • Chain 'F':
    No sequence available.

  • Chain 'G':
    No sequence available.

  • Chain 'H':
    No sequence available.