PDB entry 1lm8
View 1lm8 on RCSB PDB site
Description: Structure of a HIF-1a-pVHL-ElonginB-ElonginC Complex
Class: transcription
Keywords: REGULATION, tumor suppressor, oxygen sensing, TRANSCRIPTION
Deposited on
2002-04-30, released
2002-06-12
The last revision prior to the SCOPe 2.03 freeze date was dated
2009-02-24, with a file datestamp of
2009-02-03.
Experiment type: XRAY
Resolution: 1.85 Å
R-factor: 0.196
AEROSPACI score: 0.49
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'B':
Compound: elongin b
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d1lm8b_ - Chain 'C':
Compound: elongin c
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d1lm8c_ - Chain 'H':
Compound: Hypoxia-inducible factor 1 alpha
Species: synthetic, synthetic
Database cross-references and differences (RAF-indexed):
- Chain 'V':
Compound: von hippel-lindau disease tumor suppressor
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d1lm8v_ - Heterogens: HOH
PDB Chain Sequences:
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1lm8B (B:)
mdvflmirrhkttiftdakesstvfelkrivegilkrppdeqrlykddqllddgktlgec
gftsqtarpqapatvglafraddtfealciepfssppelpdvmkpqdsgssaneqavq
Sequence, based on observed residues (ATOM records): (download)
>1lm8B (B:)
mdvflmirrhkttiftdakesstvfelkrivegilkrppdeqrlykddqllddgktlgec
gftsqtarpqapatvglafraddtfealciepfssppelpdvmkpq
- Chain 'C':
Sequence, based on SEQRES records: (download)
>1lm8C (C:)
myvklissdghefivkrehaltsgtikamlsgpgqfaenetnevnfreipshvlskvcmy
ftykvrytnssteipefpiapeialellmaanfldc
Sequence, based on observed residues (ATOM records): (download)
>1lm8C (C:)
myvklissdghefivkrehaltsgtikamlsgpnevnfreipshvlskvcmyftykvryt
nssteipefpiapeialellmaanfldc
- Chain 'H':
No sequence available.
- Chain 'V':
Sequence, based on SEQRES records: (download)
>1lm8V (V:)
meagrprpvlrsvnsrepsqvifcnrsprvvlpvwlnfdgepqpyptlppgtgrrihsyr
ghlwlfrdagthdgllvnqtelfvpslnvdgqpifanitlpvytlkerclqvvrslvkpe
nyrrldivrslyedledhpnvqkdlerltqeriahqrmgd
Sequence, based on observed residues (ATOM records): (download)
>1lm8V (V:)
rpvlrsvnsrepsqvifcnrsprvvlpvwlnfdgepqpyptlppgtgrrihsyrghlwlf
rdagthdgllvnqtelfvpslnvdgqpifanitlpvytlkerclqvvrslvkpenyrrld
ivrslyedledhpnvqkdlerltqeriahq