PDB entry 1kyq

View 1kyq on RCSB PDB site
Description: Met8p: A bifunctional NAD-dependent dehydrogenase and ferrochelatase involved in siroheme synthesis.
Class: oxidoreductase, lyase
Keywords: homodimer, OXIDOREDUCTASE, LYASE
Deposited on 2002-02-05, released 2002-05-08
The last revision prior to the SCOPe 2.05 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: 0.22
AEROSPACI score: 0.35 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Siroheme biosynthesis protein MET8
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: Met8
    Database cross-references and differences (RAF-indexed):
    • Uniprot P15807 (0-End)
      • modified residue (0)
      • see remark 999 (14)
      • see remark 999 (32)
      • see remark 999 (101)
      • modified residue (110)
      • modified residue (187)
      • modified residue (220)
      • modified residue (250)
    Domains in SCOPe 2.05: d1kyqa1, d1kyqa2
  • Chain 'B':
    Compound: Siroheme biosynthesis protein MET8
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: Met8
    Database cross-references and differences (RAF-indexed):
    • Uniprot P15807 (0-End)
      • modified residue (0)
      • see remark 999 (14)
      • see remark 999 (32)
      • see remark 999 (60)
      • see remark 999 (101)
      • modified residue (110)
      • modified residue (187)
      • modified residue (220)
      • modified residue (250)
    Domains in SCOPe 2.05: d1kyqb1, d1kyqb2
  • Chain 'C':
    Compound: Siroheme biosynthesis protein MET8
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: Met8
    Database cross-references and differences (RAF-indexed):
    • Uniprot P15807 (0-End)
      • modified residue (0)
      • see remark 999 (14)
      • see remark 999 (32)
      • see remark 999 (101)
      • modified residue (110)
      • modified residue (187)
      • modified residue (220)
      • modified residue (250)
    Domains in SCOPe 2.05: d1kyqc1, d1kyqc2
  • Heterogens: NAD, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1kyqA (A:)
mvkslqlahqlkdkrilligggevgltrlyklmptgckltlvspdlhksiipkfgkfiqn
kdqpdyredakrfinpnwdptkneiyeyirsdfkdeyldlenendawyiimtcipdhpes
ariyhlckerfgkqqlvnvadkpdlcdfyfganleigdrlqilistnglsprfgalvrde
irnlftqmgdlaledavvklgelrrgirllapddkdvkyrmdwarrctdlfgiqhchnid
vkrlldlfkvmfqeqncslqfpprerllseycss

    Sequence, based on observed residues (ATOM records): (download) 
    >1kyqA (A:)
mvkslqlahqlkdkrilligggevgltrlyklmptgckltlvspdlhksiipkfgkfiqk
rfinpnwdptkneiyeyirsdfkdeyldlenendawyiimtcipdhpesariyhlckerf
gkqqlvnvadkpdlcdfyfganleigdrlqilistnglsprfgalvrdeirnlftqmgdl
aledavvklgelrrgirllapddkdvkyrmdwarrctdlfgiqhchnidvkrlldlfkvm
fqeqncslqfpprerllseycs

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1kyqB (B:)
mvkslqlahqlkdkrilligggevgltrlyklmptgckltlvspdlhksiipkfgkfiqn
kdqpdyredakrfinpnwdptkneiyeyirsdfkdeyldlenendawyiimtcipdhpes
ariyhlckerfgkqqlvnvadkpdlcdfyfganleigdrlqilistnglsprfgalvrde
irnlftqmgdlaledavvklgelrrgirllapddkdvkyrmdwarrctdlfgiqhchnid
vkrlldlfkvmfqeqncslqfpprerllseycss

    Sequence, based on observed residues (ATOM records): (download) 
    >1kyqB (B:)
mvkslqlahqlkdkrilligggevgltrlyklmptgckltlvspdlhksiipkfgkfiqn
kdqpdyredakrfinpnwdptkneiyeyirsdfkdeyldlenendawyiimtcipdhpes
ariyhlckerfgkqqlvnvadkpdlcdfyfganleigdrlqilistnglsprfgalvrde
irnlftqmgdlaledavvklgelrrgirllapddkdvkyrmdwarrctdlfgiqhchnid
vkrlldlfkvmfqeqncslqfpprerllseycs

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1kyqC (C:)
mvkslqlahqlkdkrilligggevgltrlyklmptgckltlvspdlhksiipkfgkfiqn
kdqpdyredakrfinpnwdptkneiyeyirsdfkdeyldlenendawyiimtcipdhpes
ariyhlckerfgkqqlvnvadkpdlcdfyfganleigdrlqilistnglsprfgalvrde
irnlftqmgdlaledavvklgelrrgirllapddkdvkyrmdwarrctdlfgiqhchnid
vkrlldlfkvmfqeqncslqfpprerllseycss

    Sequence, based on observed residues (ATOM records): (download) 
    >1kyqC (C:)
mvkslqlahqlkdkrilligggevgltrlyklmptgckltlvspdlhksiipkfgkfiqk
rfinpnwdptkneiyeyirsdfkdeyldlenendawyiimtcipdhpesariyhlckerf
gkqqlvnvadkpdlcdfyfganleigdrlqilistnglsprfgalvrdeirnlftqmgdl
aledavvklgelrrgirllapddkdvkyrmdwarrctdlfgiqhchnidvkrlldlfkvm
fqeqncslqfpprerllseycs