PDB entry 1ky9

View 1ky9 on RCSB PDB site
Description: Crystal Structure of DegP (HtrA)
Class: hydrolase
Keywords: protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm, cage-forming protein, HYDROLASE
Deposited on 2002-02-04, released 2002-04-03
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.218
AEROSPACI score: 0.2 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Protease do
    Species: Escherichia coli [TaxId:562]
    Gene: degP
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0C0V0
      • modified residue (11)
      • modified residue (17)
      • modified residue (22)
      • modified residue (41)
      • modified residue (84)
      • modified residue (126)
      • modified residue (151)
      • engineered (209)
      • modified residue (245)
      • modified residue (253)
      • modified residue (267)
      • modified residue (279)
      • modified residue (330)
    Domains in SCOPe 2.08: d1ky9a1, d1ky9a2
  • Chain 'B':
    Compound: Protease do
    Species: Escherichia coli [TaxId:562]
    Gene: degP
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0C0V0
      • modified residue (11)
      • modified residue (17)
      • modified residue (22)
      • modified residue (41)
      • modified residue (84)
      • modified residue (126)
      • modified residue (151)
      • engineered (209)
      • modified residue (245)
      • modified residue (253)
      • modified residue (267)
      • modified residue (279)
      • modified residue (330)
      • modified residue (375)
    Domains in SCOPe 2.08: d1ky9b1, d1ky9b2, d1ky9b3
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1ky9A (A:)
aetssattaqqmpslapmlekvmpsvvsinvegsttvntprmprnfqqffgddspfcqeg
spfqsspfcqggqggngggqqqkfmalgsgviidadkgyvvtnnhvvdnatvikvqlsdg
rkfdakmvgkdprsdialiqiqnpknltaikmadsdalrvgdytvaignpfglgetvtsg
ivsalgrsglnaenyenfiqtdaainrgnaggalvnlngeligintailapdggnigigf
aipsnmvknltsqmveygqvkrgelgimgtelnselakamkvdaqrgafvsqvlpnssaa
kagikagdvitslngkpissfaalraqvgtmpvgskltlgllrdgkqvnvnlelqqssqn
qvdsssifngiegaemsnkgkdqgvvvnnvktgtpaaqiglkkgdviiganqqavkniae
lrkvldskpsvlalniqrgdstiyllmq

    Sequence, based on observed residues (ATOM records): (download) 
    >1ky9A (A:)
qmpslapmlekvmpsvvsinvegsttvntprmprnfqqffggqqqkfmalgsgviidadk
gyvvtnnhvvdnatvikvqlsdgrkfdakmvgkdprsdialiqiqnpknltaikmadsda
lrvgdytvaignpfglgetvtsgivsalgrsgyenfiqtdaainrgnaggalvnlngeli
gintailapdggnigigfaipsnmvknltsqmveygqvkrgelgimgtelnselakamkv
daqrgafvsqvlpnssaakagikagdvitslngkpissfaalraqvgtmpvgskltlgll
rdgkqvnvnle

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1ky9B (B:)
aetssattaqqmpslapmlekvmpsvvsinvegsttvntprmprnfqqffgddspfcqeg
spfqsspfcqggqggngggqqqkfmalgsgviidadkgyvvtnnhvvdnatvikvqlsdg
rkfdakmvgkdprsdialiqiqnpknltaikmadsdalrvgdytvaignpfglgetvtsg
ivsalgrsglnaenyenfiqtdaainrgnaggalvnlngeligintailapdggnigigf
aipsnmvknltsqmveygqvkrgelgimgtelnselakamkvdaqrgafvsqvlpnssaa
kagikagdvitslngkpissfaalraqvgtmpvgskltlgllrdgkqvnvnlelqqssqn
qvdsssifngiegaemsnkgkdqgvvvnnvktgtpaaqiglkkgdviiganqqavkniae
lrkvldskpsvlalniqrgdstiyllmq

    Sequence, based on observed residues (ATOM records): (download) 
    >1ky9B (B:)
qmpslapmlekvmpsvvsinvegsttvntprmprnfqqffggqqqkfmalgsgviidadk
gyvvtnnhvvdnatvikvqlsdgrkfdakmvgkdprsdialiqiqnpknltaikmadsda
lrvgdytvaignpfglgetvtsgivsalgrenfiqtdaainrgnaggalvnlngeligin
tailapdggnigigfaipsnmvknltsqmveygqvkrgelgimgtelnselakamkvdaq
rgafvsqvlpnssaakagikagdvitslngkpissfaalraqvgtmpvgskltlgllrdg
kqvnvnlelqqssqnqvdsssifnemsnkgkdqgvvvnnvktgtpaaqiglkkgdviiga
nqqavkniaelrkvldskpsvlalniqrgdstiyll