PDB entry 1kxt
View 1kxt on RCSB PDB site
Description: Camelid VHH Domains in Complex with Porcine Pancreatic alpha-Amylase
Class: hydrolase, immune system
Keywords: alpha 8 beta 8; beta barrel, hydrolase, immune system
Deposited on
2002-02-01, released
2002-06-19
The last revision prior to the SCOPe 2.06 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.203
AEROSPACI score: 0.41
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: alpha-amylase, pancreatic
Species: Sus scrofa [TaxId:9823]
Database cross-references and differences (RAF-indexed):
- Uniprot P00690 (0-495)
- see remark 999 (242)
- see remark 999 (309)
- see remark 999 (322)
- see remark 999 (403)
Domains in SCOPe 2.06: d1kxta1, d1kxta2 - Chain 'B':
Compound: immunoglobulin vhh fragment
Species: Camelus dromedarius [TaxId:9838]
Gene: IGG VHH
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d1kxtb_ - Chain 'C':
Compound: alpha-amylase, pancreatic
Species: Sus scrofa [TaxId:9823]
Database cross-references and differences (RAF-indexed):
- Uniprot P00690 (0-495)
- see remark 999 (242)
- see remark 999 (309)
- see remark 999 (322)
- see remark 999 (403)
Domains in SCOPe 2.06: d1kxtc1, d1kxtc2 - Chain 'D':
Compound: immunoglobulin vhh fragment
Species: Camelus dromedarius [TaxId:9838]
Gene: IGG VHH
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d1kxtd_ - Chain 'E':
Compound: alpha-amylase, pancreatic
Species: Sus scrofa [TaxId:9823]
Database cross-references and differences (RAF-indexed):
- Uniprot P00690 (0-495)
- see remark 999 (242)
- see remark 999 (309)
- see remark 999 (322)
- see remark 999 (403)
Domains in SCOPe 2.06: d1kxte1, d1kxte2 - Chain 'F':
Compound: immunoglobulin vhh fragment
Species: Camelus dromedarius [TaxId:9838]
Gene: IGG VHH
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d1kxtf_ - Heterogens: CA, CL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>1kxtA (A:)
qyapqtqsgrtsivhlfewrwvdialecerylgpkgfggvqvsppnenivvtnpsrpwwe
ryqpvsyklctrsgnenefrdmvtrcnnvgvriyvdavinhmcgsgaaagtgttcgsycn
pgsrefpavpysawdfndgkcktasggiesyndpyqvrdcqlvglldlalekdyvrsmia
dylnklidigvagfridaskhmwpgdikavldklhnlntnwfpagsrpfifqevidlgge
aiksseyfgngrvtefkygaklgtvvrkwsgekmsylknwgegwgfmpsdralvfvdnhd
nqrghgaggssiltfwdarlykiavgfmlahpygftrvmssyrwarnfvngedvndwigp
pnnngvikevtinadttcgndwvcehrwreirnmvwfrnvvdgqpfanwwdngsnqvafg
rgnrgfivfnnddwqlsstlqtglpggtycdvisgdkvgnsctgikvyvssdgtaqfsis
nsaedpfiaihaeskl
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1kxtB (B:)
qvqlvasgggsvqaggslrlscaasgytfssypmgwyrqapgkecelsarifsdgsanya
dsvkgrftisrdnaantaylqmdslkpedtavyycaagpgsgklvvagrtcygpnywgqg
tqvtvss
Sequence, based on observed residues (ATOM records): (download)
>1kxtB (B:)
qvqlvasgggsvqaggslrlscaastfssypmgwyrqapgkecelsarifsdgsanyads
vkgrftisrdnaantaylqmdslkpedtavyycaagpgsgklvvagrtcygpnywgqgtq
vtv
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>1kxtC (C:)
qyapqtqsgrtsivhlfewrwvdialecerylgpkgfggvqvsppnenivvtnpsrpwwe
ryqpvsyklctrsgnenefrdmvtrcnnvgvriyvdavinhmcgsgaaagtgttcgsycn
pgsrefpavpysawdfndgkcktasggiesyndpyqvrdcqlvglldlalekdyvrsmia
dylnklidigvagfridaskhmwpgdikavldklhnlntnwfpagsrpfifqevidlgge
aiksseyfgngrvtefkygaklgtvvrkwsgekmsylknwgegwgfmpsdralvfvdnhd
nqrghgaggssiltfwdarlykiavgfmlahpygftrvmssyrwarnfvngedvndwigp
pnnngvikevtinadttcgndwvcehrwreirnmvwfrnvvdgqpfanwwdngsnqvafg
rgnrgfivfnnddwqlsstlqtglpggtycdvisgdkvgnsctgikvyvssdgtaqfsis
nsaedpfiaihaeskl
- Chain 'D':
Sequence, based on SEQRES records: (download)
>1kxtD (D:)
qvqlvasgggsvqaggslrlscaasgytfssypmgwyrqapgkecelsarifsdgsanya
dsvkgrftisrdnaantaylqmdslkpedtavyycaagpgsgklvvagrtcygpnywgqg
tqvtvss
Sequence, based on observed residues (ATOM records): (download)
>1kxtD (D:)
qvqlvasgggsvqaggslrlscaastfssypmgwyrqapgkecelsarifsdgsanyads
vkgrftisrdnaantaylqmdslkpedtavyycaagpgsgklvvagrtcygpnywgqgtq
vtv
- Chain 'E':
Sequence; same for both SEQRES and ATOM records: (download)
>1kxtE (E:)
qyapqtqsgrtsivhlfewrwvdialecerylgpkgfggvqvsppnenivvtnpsrpwwe
ryqpvsyklctrsgnenefrdmvtrcnnvgvriyvdavinhmcgsgaaagtgttcgsycn
pgsrefpavpysawdfndgkcktasggiesyndpyqvrdcqlvglldlalekdyvrsmia
dylnklidigvagfridaskhmwpgdikavldklhnlntnwfpagsrpfifqevidlgge
aiksseyfgngrvtefkygaklgtvvrkwsgekmsylknwgegwgfmpsdralvfvdnhd
nqrghgaggssiltfwdarlykiavgfmlahpygftrvmssyrwarnfvngedvndwigp
pnnngvikevtinadttcgndwvcehrwreirnmvwfrnvvdgqpfanwwdngsnqvafg
rgnrgfivfnnddwqlsstlqtglpggtycdvisgdkvgnsctgikvyvssdgtaqfsis
nsaedpfiaihaeskl
- Chain 'F':
Sequence, based on SEQRES records: (download)
>1kxtF (F:)
qvqlvasgggsvqaggslrlscaasgytfssypmgwyrqapgkecelsarifsdgsanya
dsvkgrftisrdnaantaylqmdslkpedtavyycaagpgsgklvvagrtcygpnywgqg
tqvtvss
Sequence, based on observed residues (ATOM records): (download)
>1kxtF (F:)
qvqlvasgggsvqaggslrlscaastfssypmgwyrqapgkecelsarifsdgsanyads
vkgrftisrdnaantaylqmdslkpedtavyycaagpgsgklvvagrtcygpnywgqgtq
vtv