PDB entry 1ktr

View 1ktr on RCSB PDB site
Description: Crystal Structure of the Anti-His Tag Antibody 3D5 Single-Chain Fragment (scFv) in Complex with a Oligohistidine peptide
Class: immune system
Keywords: immunoglobulin domains, single chain antibody-antigen complex, His tag recognition, scfv, IMMUNE SYSTEM
Deposited on 2002-01-17, released 2002-05-15
The last revision prior to the SCOPe 2.08 freeze date was dated 2018-05-02, with a file datestamp of 2018-04-27.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: N/A
AEROSPACI score: 0.18 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'L':
    Compound: Anti-his tag antibody 3d5 variable light chain, Peptide linker, Anti-his tag antibody 3d5 variable heavy chain
    Species: Mus musculus [TaxId:10090]
    Gene: Monoclonal Antibody 3D5
    Database cross-references and differences (RAF-indexed):
    • PDB 1KTR (Start-249)
    Domains in SCOPe 2.08: d1ktrl_
  • Chain 'P':
    Compound: Oligohistidine peptide Antigen
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 1KTR (Start-5)
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >1ktrL (L:)
dykdilmtqtpsslpvslgdqasiscrssqsivhsngntylewylqkpgqspklliykvs
nrfsgvpdrfsgsgsgtdftlkisrveaedlgvyycfqgshvpftfgsgtkleikrgggg
sggggsggggsggggsqvqlqqsgpedvkpgasvkisckasgytftdyymnwvkqspgkg
lewigdinpnnggtsynqkfkgratltvdkssstaymelrsltsedssvyycesqsgayw
gqgttvtvsa

    Sequence, based on observed residues (ATOM records): (download) 
    >1ktrL (L:)
dilmtqtpsslpvslgdqasiscrssqsivhsngntylewylqkpgqspklliykvsnrf
sgvpdrfsgsgsgtdftlkisrveaedlgvyycfqgshvpftfgsgtkleikrggqvqlq
qsgpedvkpgasvkisckasgytftdyymnwvkqspgkglewigdinpnnggtsynqkfk
gratltvdkssstaymelrsltsedssvyycesqsgaywgqgttvtvsa

  • Chain 'P':
    No sequence available.