PDB entry 1kn0

View 1kn0 on RCSB PDB site
Description: Crystal Structure of the human Rad52 protein
Class: DNA binding protein
Keywords: beta-beta-beta-alpha fold, DNA-binding protein, ring protein, RIKEN Structural Genomics/Proteomics Initiative, RSGI, Structural Genomics, DNA BINDING PROTEIN
Deposited on 2001-12-18, released 2002-09-04
The last revision prior to the SCOPe 2.05 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2.85 Å
R-factor: 0.231
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Rad52
    Species: Homo sapiens [TaxId:9606]
    Gene: Rad52
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d1kn0a_
  • Chain 'B':
    Compound: Rad52
    Species: Homo sapiens [TaxId:9606]
    Gene: Rad52
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d1kn0b_
  • Chain 'C':
    Compound: Rad52
    Species: Homo sapiens [TaxId:9606]
    Gene: Rad52
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d1kn0c_
  • Chain 'D':
    Compound: Rad52
    Species: Homo sapiens [TaxId:9606]
    Gene: Rad52
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d1kn0d_
  • Chain 'E':
    Compound: Rad52
    Species: Homo sapiens [TaxId:9606]
    Gene: Rad52
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d1kn0e_
  • Chain 'F':
    Compound: Rad52
    Species: Homo sapiens [TaxId:9606]
    Gene: Rad52
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d1kn0f_
  • Chain 'G':
    Compound: Rad52
    Species: Homo sapiens [TaxId:9606]
    Gene: Rad52
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d1kn0g_
  • Chain 'H':
    Compound: Rad52
    Species: Homo sapiens [TaxId:9606]
    Gene: Rad52
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d1kn0h_
  • Chain 'I':
    Compound: Rad52
    Species: Homo sapiens [TaxId:9606]
    Gene: Rad52
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d1kn0i_
  • Chain 'J':
    Compound: Rad52
    Species: Homo sapiens [TaxId:9606]
    Gene: Rad52
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d1kn0j_
  • Chain 'K':
    Compound: Rad52
    Species: Homo sapiens [TaxId:9606]
    Gene: Rad52
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d1kn0k_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1kn0A (A:)
msgteeailggrdshpaagggsvlcfgqcqytaeeyqaiqkalrqrlgpeyissrmaggg
qkvcyieghrvinlanemfgyngwahsitqqnvdfvdlnngkfyvgvcafvrvqlkdgsy
hedvgygvseglkskalslekarkeavtdglkralrsfgnalgncildkdylrslnklpr
qlplevdltkakrqdlepsveearynscrpnm

    Sequence, based on observed residues (ATOM records): (download) 
    >1kn0A (A:)
cfgqcqytaeeyqaiqkalrqrlgpeyissrmagggqkvcyieghrvinlanemfgyngw
ahsitqqnvdfvdlnngkfyvgvcafvrvqlkdgsyhedvgygvseglkskalslekark
eavtdglkralrsfgnalgncildkdylrslnklprqlplevdltkakrqdlepsveear
ynsc

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1kn0B (B:)
msgteeailggrdshpaagggsvlcfgqcqytaeeyqaiqkalrqrlgpeyissrmaggg
qkvcyieghrvinlanemfgyngwahsitqqnvdfvdlnngkfyvgvcafvrvqlkdgsy
hedvgygvseglkskalslekarkeavtdglkralrsfgnalgncildkdylrslnklpr
qlplevdltkakrqdlepsveearynscrpnm

    Sequence, based on observed residues (ATOM records): (download) 
    >1kn0B (B:)
cfgqcqytaeeyqaiqkalrqrlgpeyissrmagggqkvcyieghrvinlanemfgyngw
ahsitqqnvdfvdlnngkfyvgvcafvrvqlkdgsyhedvgygvseglkskalslekark
eavtdglkralrsfgnalgncildkdylrslnklprqlplevdltkakrqdlepsveear
ynsc

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1kn0C (C:)
msgteeailggrdshpaagggsvlcfgqcqytaeeyqaiqkalrqrlgpeyissrmaggg
qkvcyieghrvinlanemfgyngwahsitqqnvdfvdlnngkfyvgvcafvrvqlkdgsy
hedvgygvseglkskalslekarkeavtdglkralrsfgnalgncildkdylrslnklpr
qlplevdltkakrqdlepsveearynscrpnm

    Sequence, based on observed residues (ATOM records): (download) 
    >1kn0C (C:)
cfgqcqytaeeyqaiqkalrqrlgpeyissrmagggqkvcyieghrvinlanemfgyngw
ahsitqqnvdfvdlnngkfyvgvcafvrvqlkdgsyhedvgygvseglkskalslekark
eavtdglkralrsfgnalgncildkdylrslnklprqlplevdltkakrqdlepsveear
ynsc

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1kn0D (D:)
msgteeailggrdshpaagggsvlcfgqcqytaeeyqaiqkalrqrlgpeyissrmaggg
qkvcyieghrvinlanemfgyngwahsitqqnvdfvdlnngkfyvgvcafvrvqlkdgsy
hedvgygvseglkskalslekarkeavtdglkralrsfgnalgncildkdylrslnklpr
qlplevdltkakrqdlepsveearynscrpnm

    Sequence, based on observed residues (ATOM records): (download) 
    >1kn0D (D:)
cfgqcqytaeeyqaiqkalrqrlgpeyissrmagggqkvcyieghrvinlanemfgyngw
ahsitqqnvdfvdlnngkfyvgvcafvrvqlkdgsyhedvgygvseglkskalslekark
eavtdglkralrsfgnalgncildkdylrslnklprqlplevdltkakrqdlepsveear
ynsc

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >1kn0E (E:)
msgteeailggrdshpaagggsvlcfgqcqytaeeyqaiqkalrqrlgpeyissrmaggg
qkvcyieghrvinlanemfgyngwahsitqqnvdfvdlnngkfyvgvcafvrvqlkdgsy
hedvgygvseglkskalslekarkeavtdglkralrsfgnalgncildkdylrslnklpr
qlplevdltkakrqdlepsveearynscrpnm

    Sequence, based on observed residues (ATOM records): (download) 
    >1kn0E (E:)
cfgqcqytaeeyqaiqkalrqrlgpeyissrmagggqkvcyieghrvinlanemfgyngw
ahsitqqnvdfvdlnngkfyvgvcafvrvqlkdgsyhedvgygvseglkskalslekark
eavtdglkralrsfgnalgncildkdylrslnklprqlplevdltkakrqdlepsveear
ynsc

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >1kn0F (F:)
msgteeailggrdshpaagggsvlcfgqcqytaeeyqaiqkalrqrlgpeyissrmaggg
qkvcyieghrvinlanemfgyngwahsitqqnvdfvdlnngkfyvgvcafvrvqlkdgsy
hedvgygvseglkskalslekarkeavtdglkralrsfgnalgncildkdylrslnklpr
qlplevdltkakrqdlepsveearynscrpnm

    Sequence, based on observed residues (ATOM records): (download) 
    >1kn0F (F:)
cfgqcqytaeeyqaiqkalrqrlgpeyissrmagggqkvcyieghrvinlanemfgyngw
ahsitqqnvdfvdlnngkfyvgvcafvrvqlkdgsyhedvgygvseglkskalslekark
eavtdglkralrsfgnalgncildkdylrslnklprqlplevdltkakrqdlepsveear
ynsc

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >1kn0G (G:)
msgteeailggrdshpaagggsvlcfgqcqytaeeyqaiqkalrqrlgpeyissrmaggg
qkvcyieghrvinlanemfgyngwahsitqqnvdfvdlnngkfyvgvcafvrvqlkdgsy
hedvgygvseglkskalslekarkeavtdglkralrsfgnalgncildkdylrslnklpr
qlplevdltkakrqdlepsveearynscrpnm

    Sequence, based on observed residues (ATOM records): (download) 
    >1kn0G (G:)
cfgqcqytaeeyqaiqkalrqrlgpeyissrmagggqkvcyieghrvinlanemfgyngw
ahsitqqnvdfvdlnngkfyvgvcafvrvqlkdgsyhedvgygvseglkskalslekark
eavtdglkralrsfgnalgncildkdylrslnklprqlplevdltkakrqdlepsveear
ynsc

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >1kn0H (H:)
msgteeailggrdshpaagggsvlcfgqcqytaeeyqaiqkalrqrlgpeyissrmaggg
qkvcyieghrvinlanemfgyngwahsitqqnvdfvdlnngkfyvgvcafvrvqlkdgsy
hedvgygvseglkskalslekarkeavtdglkralrsfgnalgncildkdylrslnklpr
qlplevdltkakrqdlepsveearynscrpnm

    Sequence, based on observed residues (ATOM records): (download) 
    >1kn0H (H:)
cfgqcqytaeeyqaiqkalrqrlgpeyissrmagggqkvcyieghrvinlanemfgyngw
ahsitqqnvdfvdlnngkfyvgvcafvrvqlkdgsyhedvgygvseglkskalslekark
eavtdglkralrsfgnalgncildkdylrslnklprqlplevdltkakrqdlepsveear
ynsc

  • Chain 'I':
    Sequence, based on SEQRES records: (download) 
    >1kn0I (I:)
msgteeailggrdshpaagggsvlcfgqcqytaeeyqaiqkalrqrlgpeyissrmaggg
qkvcyieghrvinlanemfgyngwahsitqqnvdfvdlnngkfyvgvcafvrvqlkdgsy
hedvgygvseglkskalslekarkeavtdglkralrsfgnalgncildkdylrslnklpr
qlplevdltkakrqdlepsveearynscrpnm

    Sequence, based on observed residues (ATOM records): (download) 
    >1kn0I (I:)
cfgqcqytaeeyqaiqkalrqrlgpeyissrmagggqkvcyieghrvinlanemfgyngw
ahsitqqnvdfvdlnngkfyvgvcafvrvqlkdgsyhedvgygvseglkskalslekark
eavtdglkralrsfgnalgncildkdylrslnklprqlplevdltkakrqdlepsveear
ynsc

  • Chain 'J':
    Sequence, based on SEQRES records: (download) 
    >1kn0J (J:)
msgteeailggrdshpaagggsvlcfgqcqytaeeyqaiqkalrqrlgpeyissrmaggg
qkvcyieghrvinlanemfgyngwahsitqqnvdfvdlnngkfyvgvcafvrvqlkdgsy
hedvgygvseglkskalslekarkeavtdglkralrsfgnalgncildkdylrslnklpr
qlplevdltkakrqdlepsveearynscrpnm

    Sequence, based on observed residues (ATOM records): (download) 
    >1kn0J (J:)
cfgqcqytaeeyqaiqkalrqrlgpeyissrmagggqkvcyieghrvinlanemfgyngw
ahsitqqnvdfvdlnngkfyvgvcafvrvqlkdgsyhedvgygvseglkskalslekark
eavtdglkralrsfgnalgncildkdylrslnklprqlplevdltkakrqdlepsveear
ynsc

  • Chain 'K':
    Sequence, based on SEQRES records: (download) 
    >1kn0K (K:)
msgteeailggrdshpaagggsvlcfgqcqytaeeyqaiqkalrqrlgpeyissrmaggg
qkvcyieghrvinlanemfgyngwahsitqqnvdfvdlnngkfyvgvcafvrvqlkdgsy
hedvgygvseglkskalslekarkeavtdglkralrsfgnalgncildkdylrslnklpr
qlplevdltkakrqdlepsveearynscrpnm

    Sequence, based on observed residues (ATOM records): (download) 
    >1kn0K (K:)
cfgqcqytaeeyqaiqkalrqrlgpeyissrmagggqkvcyieghrvinlanemfgyngw
ahsitqqnvdfvdlnngkfyvgvcafvrvqlkdgsyhedvgygvseglkskalslekark
eavtdglkralrsfgnalgncildkdylrslnklprqlplevdltkakrqdlepsveear
ynsc