PDB entry 1kb9
View 1kb9 on RCSB PDB site
Description: yeast cytochrome bc1 complex
Class: oxidoreductase/electron transport
Keywords: oxidoreductase, ubiquinone, stigmatellin, cardiolipin, phosphatidylinositol, phosphatidylcholin, phosphatidylethanolamin, undecyl-maltopyranoside,, OXIDOREDUCTASE-ELECTRON TRANSPORT COMPLEX
Deposited on
2001-11-05, released
2002-09-18
The last revision prior to the SCOPe 2.08 freeze date was dated
2011-08-31, with a file datestamp of
2011-08-26.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.218
AEROSPACI score: 0.34
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: ubiquinol-cytochrome c reductase complex core protein I
Species: Saccharomyces cerevisiae [TaxId:4932]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1kb9a1, d1kb9a2 - Chain 'B':
Compound: ubiquinol-cytochrome c reductase complex core protein 2
Species: Saccharomyces cerevisiae [TaxId:4932]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1kb9b1, d1kb9b2 - Chain 'C':
Compound: cytochrome b
Species: Saccharomyces cerevisiae [TaxId:4932]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1kb9c1, d1kb9c2 - Chain 'D':
Compound: cytochrome c1, heme protein
Species: Saccharomyces cerevisiae [TaxId:4932]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1kb9d1, d1kb9d2 - Chain 'E':
Compound: ubiquinol-cytochrome c reductase iron-sulfur subunit
Species: Saccharomyces cerevisiae [TaxId:4932]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1kb9e1, d1kb9e2 - Chain 'F':
Compound: ubiquinol-cytochrome c reductase complex 17 kd protein
Species: Saccharomyces cerevisiae [TaxId:4932]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1kb9f_ - Chain 'G':
Compound: ubiquinol-cytochrome c reductase complex 14 kd protein
Species: Saccharomyces cerevisiae [TaxId:4932]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1kb9g_ - Chain 'H':
Compound: ubiquinol-cytochrome c reductase complex ubiquinone-binding protein qp-c
Species: Saccharomyces cerevisiae [TaxId:4932]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1kb9h_ - Chain 'I':
Compound: ubiquinol-cytochrome c reductase complex 7.3 kd protein
Species: Saccharomyces cerevisiae [TaxId:4932]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1kb9i_ - Chain 'J':
Compound: heavy chain (vh) of fv-fragment
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1kb9j_ - Chain 'K':
Compound: light chain (vl) of fv-fragment
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1kb9k_ - Heterogens: HEM, FES, SMA, UQ6, PIE, PEF, CDL, PCF, UMQ, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>1kb9A (A:)
aevtqlsngivvatehnpsahtasvgvvfgsgaanenpynngvsnlwkniflskensava
akeglalssnisrdfqsyivsslpgstdksldflnqsfiqqkanllsssnfeatkksvlk
qvqdfedndhpnrvlehlhstafqntplslptrgtleslenlvvadlesfannhflnsna
vvvgtgnikhedlvnsiesknlslqtgtkpvlkkkaaflgsevrlrddtlpkawislave
gepvnspnyfvaklaaqifgsynafepasrlqgiklldniqeyqlcdnfnhfslsykdsg
lwgfstatrnvtmiddlihftlkqwnrltisvtdteveraksllklqlgqlyesgnpvnd
anllgaevlikgsklslgeafkkidaitvkdvkawagkrlwdqdiaiagtgqieglldym
rirsdmsmmrw
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>1kb9B (B:)
ltvsardaptkistlavkvhggsryatkdgvahllnrfnfqntntrsalklvresellgg
tfkstldreyitlkatflkddlpyyvnaladvlyktafkpheltesvlpaarydyavaeq
cpvksaedqlyaitfrkglgnpllydgvervslqdikdfadkvytkenlevsgenvvead
lkrfvdesllstlpagkslvsksepkfflgeenrvrfigdsvaaigipvnkaslaqyevl
anyltsalselsglissakldkftdgglftlfvrdqdsavvssnikkivadlkkgkdlsp
ainytklknavqnesvsspielnfdavkdfklgkfnyvavgdvsnlpyldel
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>1kb9C (C:)
mafrksnvylslvnsyiidspqpssinywwnmgsllglclviqivtgifmamhyssniel
afssvehimrdvhngyilrylhangasfffmvmfmhmakglyygsyrsprvtlwnvgvii
ftltiataflgyccvygqmshwgatvitnlfsaipfvgndivswlwggfsvsnptiqrff
alhylvpfiiaamvimhlmalhihgssnplgitgnldripmhsyfifkdlvtvflfmlil
alfvfyspntlghpdnyipgnplvtpasivpewyllpfyailrsipdkllgvitmfaail
vllvlpftdrsvvrgntfkvlskffffifvfnfvllgqigachvevpyvlmgqiatfiyf
ayfliivpvistienvlfyigrvnk
- Chain 'D':
Sequence; same for both SEQRES and ATOM records: (download)
>1kb9D (D:)
mtaaehglhapayawshngpfetfdhasirrgyqvyrevcaachsldrvawrtlvgvsht
neevrnmaeefeyddepdeqgnpkkrpgklsdyipgpypneqaaraanqgalppdlsliv
karhggcdyifslltgypdeppagvalppgsnynpyfpggsiamarvlfddmveyedgtp
attsqmakdvttflnwcaepehderkrlglktviilsslyllsiwvkkfkwagiktrkfv
fnppkp
- Chain 'E':
Sequence; same for both SEQRES and ATOM records: (download)
>1kb9E (E:)
kstyrtpnfddvlkenndadkgrsyayfmvgamgllssagakstvetfissmtatadvla
makvevnlaaiplgknvvvkwqgkpvfirhrtpheiqeansvdmsalkdpqtdadrvkdp
qwlimlgicthlgcvpigeagdfggwfcpchgshydisgrirkgpaplnleipayefdgd
kvivg
- Chain 'F':
Sequence; same for both SEQRES and ATOM records: (download)
>1kb9F (F:)
vtdqledlrehfknteegkalvhhyeecaervkiqqqqpgyadlehkedcveeffhlqhy
ldtataprlfdklk
- Chain 'G':
Sequence; same for both SEQRES and ATOM records: (download)
>1kb9G (G:)
qsftsiarigdyilkspvlsklcvpvanqfinlagykklglkfddliaeenpimqtalrr
lpedesyarayriirahqtelthhllprnewikaqedvpyllpyileaeaaakekdeldn
ievsk
- Chain 'H':
Sequence; same for both SEQRES and ATOM records: (download)
>1kb9H (H:)
gppsgktymgwwghmggpkqkgitsyavspyaqkplqgifhnavfnsfrrfksqflyvli
pagiywywwkngneyneflyskagreelervnv
- Chain 'I':
Sequence; same for both SEQRES and ATOM records: (download)
>1kb9I (I:)
sslyktffkrnavfvgtifagafvfqtvfdtaitswyenhnkgklwkdvkariaa
- Chain 'J':
Sequence; same for both SEQRES and ATOM records: (download)
>1kb9J (J:)
evklqesgaglvqpsqslsltcsvtgysitsgyywnwirlfpgnklewvgyisnvgdnny
npslkdrlsitrdtsknqfflklnsvttedtatyycarseyysvtgyamdywgqgttvtv
ssawrhp
- Chain 'K':
Sequence; same for both SEQRES and ATOM records: (download)
>1kb9K (K:)
dieltqtpvslaaslgdrvtiscrasqdinnflnwyqqkpdgtiklliyytsrlhagvps
rfsgsgsgtdysltisnlepediatyfcqhhikfpwtfgagtkleik