PDB entry 1k6q
View 1k6q on RCSB PDB site
Description: Crystal structure of antibody Fab fragment D3
Class: immune system
Keywords: antigen-antibody recognition, crystal structure, blood coagulation, tissue factor
Deposited on
2001-10-17, released
2002-04-17
The last revision prior to the SCOP 1.73 freeze date was dated
2002-12-18, with a file datestamp of
2007-06-04.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.225
AEROSPACI score: 0.3
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'H':
Compound: immunoglobulin Fab D3, heavy chain
Species: MUS MUSCULUS
Domains in SCOP 1.73: d1k6qh1, d1k6qh2 - Chain 'L':
Compound: immunoglobulin Fab D3, light chain
Species: MUS MUSCULUS
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.73: d1k6ql1, d1k6ql2 - Heterogens: HOH
PDB Chain Sequences:
- Chain 'H':
Sequence, based on SEQRES records: (download)
>1k6qH (H:)
evqlqqsgaelvrpgalvklsckasgfnikdyymhwvkqrpeqgleligwidpengntiy
dpkfqdkasitadtssntaylqlssltsedtavyycardtaayfdywgqgttltvssakt
tppsvyplapgsaaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdlyt
lsssvtvpsstwpsetvtcnvahpasstkvdkkkip
Sequence, based on observed residues (ATOM records): (download)
>1k6qH (H:)
evqlqqsgaelvrpgalvklsckasgfnikdyymhwvkqrpeqgleligwidpengntiy
dpkfqdkasitadtssntaylqlssltsedtavyycardtaayfdywgqgttltvssakt
tppsvyplapgsansmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdlytlss
svtvpsstwpsetvtcnvahpasstkvdkkkip
- Chain 'L':
Sequence, based on SEQRES records: (download)
>1k6qL (L:)
dikmtqspssmsaslgesvtitckasrdiksylswyqqkpwkspktliyyatsladgvps
rfsgsgsgqdysltisslesddtatyyclqhgespftfgsgtklelkradaaptvsifpp
sseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstlt
ltkdeyerhnsytceathktstspivksfn
Sequence, based on observed residues (ATOM records): (download)
>1k6qL (L:)
dikmtqspssmsaslgesvtitckasrdiksylswyqqkpwkspktliyyatsladgvps
rfsgsgsgqdysltisslesddtatyyclqhgespftfgsgtklelkradaaptvsifpp
sseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstlt
ltkdeyerhnsytceatpivksfn