PDB entry 1k6q

View 1k6q on RCSB PDB site
Description: Crystal structure of antibody Fab fragment D3
Class: immune system
Keywords: antigen-antibody recognition, crystal structure, blood coagulation, tissue factor
Deposited on 2001-10-17, released 2002-04-17
The last revision prior to the SCOP 1.73 freeze date was dated 2002-12-18, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.225
AEROSPACI score: 0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'H':
    Compound: immunoglobulin Fab D3, heavy chain
    Species: MUS MUSCULUS
    Domains in SCOP 1.73: d1k6qh1, d1k6qh2
  • Chain 'L':
    Compound: immunoglobulin Fab D3, light chain
    Species: MUS MUSCULUS
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1k6ql1, d1k6ql2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >1k6qH (H:)
evqlqqsgaelvrpgalvklsckasgfnikdyymhwvkqrpeqgleligwidpengntiy
dpkfqdkasitadtssntaylqlssltsedtavyycardtaayfdywgqgttltvssakt
tppsvyplapgsaaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdlyt
lsssvtvpsstwpsetvtcnvahpasstkvdkkkip

    Sequence, based on observed residues (ATOM records): (download) 
    >1k6qH (H:)
evqlqqsgaelvrpgalvklsckasgfnikdyymhwvkqrpeqgleligwidpengntiy
dpkfqdkasitadtssntaylqlssltsedtavyycardtaayfdywgqgttltvssakt
tppsvyplapgsansmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdlytlss
svtvpsstwpsetvtcnvahpasstkvdkkkip

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >1k6qL (L:)
dikmtqspssmsaslgesvtitckasrdiksylswyqqkpwkspktliyyatsladgvps
rfsgsgsgqdysltisslesddtatyyclqhgespftfgsgtklelkradaaptvsifpp
sseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstlt
ltkdeyerhnsytceathktstspivksfn

    Sequence, based on observed residues (ATOM records): (download) 
    >1k6qL (L:)
dikmtqspssmsaslgesvtitckasrdiksylswyqqkpwkspktliyyatsladgvps
rfsgsgsgqdysltisslesddtatyyclqhgespftfgsgtklelkradaaptvsifpp
sseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstlt
ltkdeyerhnsytceatpivksfn