PDB entry 1je8

View 1je8 on RCSB PDB site
Description: Two-Component response regulator NarL/DNA Complex: DNA Bending Found in a High Affinity Site
Class: transcription/DNA
Keywords: Protein-DNA complex, Two-Component response regulator, helix-turn-helix, DNA bending, TRANSCRIPTION/DNA COMPLEX
Deposited on 2001-06-15, released 2002-09-27
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.12 Å
R-factor: 0.228
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: nitrate/nitrite response regulator protein narl
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P10957 (Start-81)
      • modified residue (40)
      • modified residue (59)
      • modified residue (63)
    Domains in SCOPe 2.08: d1je8a_
  • Chain 'B':
    Compound: nitrate/nitrite response regulator protein narl
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P10957 (Start-81)
      • modified residue (40)
      • modified residue (59)
      • modified residue (63)
    Domains in SCOPe 2.08: d1je8b_
  • Chain 'C':
    Compound: 5'-d(*cp*gp*tp*ap*cp*cp*cp*ap*tp*tp*ap*ap*tp*gp*gp*gp*tp*ap*cp*g)-3'
    Species: synthetic, synthetic
  • Chain 'D':
    Compound: 5'-d(*cp*gp*tp*ap*cp*cp*cp*ap*tp*tp*ap*ap*tp*gp*gp*gp*tp*ap*cp*g)-3'
    Species: synthetic, synthetic
  • Chain 'E':
    Compound: nitrate/nitrite response regulator protein narl
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P10957 (Start-81)
      • modified residue (40)
      • modified residue (59)
      • modified residue (63)
    Domains in SCOPe 2.08: d1je8e_
  • Chain 'F':
    Compound: nitrate/nitrite response regulator protein narl
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P10957 (Start-81)
      • modified residue (40)
      • modified residue (59)
      • modified residue (63)
    Domains in SCOPe 2.08: d1je8f_
  • Chain 'G':
    Compound: 5'-d(*cp*gp*tp*ap*cp*cp*cp*ap*tp*tp*ap*ap*tp*gp*gp*gp*tp*ap*cp*g)-3'
    Species: synthetic, synthetic
  • Chain 'H':
    Compound: 5'-d(*cp*gp*tp*ap*cp*cp*cp*ap*tp*tp*ap*ap*tp*gp*gp*gp*tp*ap*cp*g)-3'
    Species: synthetic, synthetic
  • Heterogens: SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >1je8A (A:)
    mrgshhhhhhgsatterdvnqltprerdilkliaqglpnkmiarrlditestvkvhvkhm
    lkkmklksrveaavwvhqerif
    

    Sequence, based on observed residues (ATOM records): (download)
    >1je8A (A:)
    rdvnqltprerdilkliaqglpnkmiarrlditestvkvhvkhmlkkmklksrveaavwv
    hqerif
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >1je8B (B:)
    mrgshhhhhhgsatterdvnqltprerdilkliaqglpnkmiarrlditestvkvhvkhm
    lkkmklksrveaavwvhqerif
    

    Sequence, based on observed residues (ATOM records): (download)
    >1je8B (B:)
    rdvnqltprerdilkliaqglpnkmiarrlditestvkvhvkhmlkkmklksrveaavwv
    hqerif
    

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >1je8E (E:)
    mrgshhhhhhgsatterdvnqltprerdilkliaqglpnkmiarrlditestvkvhvkhm
    lkkmklksrveaavwvhqerif
    

    Sequence, based on observed residues (ATOM records): (download)
    >1je8E (E:)
    erdvnqltprerdilkliaqglpnkmiarrlditestvkvhvkhmlkkmklksrveaavw
    vhqerif
    

  • Chain 'F':
    Sequence, based on SEQRES records: (download)
    >1je8F (F:)
    mrgshhhhhhgsatterdvnqltprerdilkliaqglpnkmiarrlditestvkvhvkhm
    lkkmklksrveaavwvhqerif
    

    Sequence, based on observed residues (ATOM records): (download)
    >1je8F (F:)
    rdvnqltprerdilkliaqglpnkmiarrlditestvkvhvkhmlkkmklksrveaavwv
    hqerif
    

  • Chain 'G':
    No sequence available.

  • Chain 'H':
    No sequence available.