PDB entry 1jdp

View 1jdp on RCSB PDB site
Description: Crystal Structure of Hormone/Receptor Complex
Class: signaling protein
Keywords: hormone/receptor complex, crystal structure, natriuretic peptide receptor, allosteric activation
Deposited on 2001-06-14, released 2001-09-05
The last revision prior to the SCOP 1.73 freeze date was dated 2003-04-01, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.227
AEROSPACI score: 0.39 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: atrial natriuretic peptide clearance receptor
    Species: HOMO SAPIENS
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1jdpa_
  • Chain 'B':
    Compound: atrial natriuretic peptide clearance receptor
    Species: HOMO SAPIENS
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1jdpb_
  • Chain 'H':
    Compound: c-type natriuretic peptide
    Species: HOMO SAPIENS
    Database cross-references and differences (RAF-indexed):
  • Heterogens: NDG, NAG, CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1jdpA (A:)
erealppqkievlvllpqddsylfsltrvrpaieyalrsvegngtgrrllppgtrfqvay
edsdcgnralfslvdrvaaargakpdlilgpvceyaaapvarlashwdlpmlsagalaag
fqhkdseyshltrvapayakmgemmlalfrhhhwsraalvysddklerncyftlegvhev
fqeeglhtsiysfdetkdldledivrniqaservvimcassdtirsimlvahrhgmtsgd
yaffnielfnsssygdgswkrgdkhdfeakqaysslqtvtllrtvkpefekfsmevkssv
ekqglnmedyvnmfvegfhdaillyvlalhevlragyskkdggkiiqqtwnrtfegiagq
vsidangdrygdfsviamtdveagtqevigdyfgkegrfemrpnvkypwgplklridenr
ivehtnsspckscgleesavt

    Sequence, based on observed residues (ATOM records): (download) 
    >1jdpA (A:)
ealppqkievlvllpqddsylfsltrvrpaieyalrsvegrllppgtrfqvayedsdcgn
ralfslvdrvaaargakpdlilgpvceyaaapvarlashwdlpmlsagalaagfqhkdse
yshltrvapayakmgemmlalfrhhhwsraalvysddklerncyftlegvhevfqeeglh
tsiysfdetkdldledivrniqaservvimcassdtirsimlvahrhgmtsgdyaffnie
lfnsssygdgswkrgdkhdfeakqaysslqtvtllrtvkpefekfsmevkssvekqglnm
edyvnmfvegfhdaillyvlalhevlragyskkdggkiiqqtwnrtfegiagqvsidang
drygdfsviamtdveagtqevigdyfgkegrfemrp

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1jdpB (B:)
erealppqkievlvllpqddsylfsltrvrpaieyalrsvegngtgrrllppgtrfqvay
edsdcgnralfslvdrvaaargakpdlilgpvceyaaapvarlashwdlpmlsagalaag
fqhkdseyshltrvapayakmgemmlalfrhhhwsraalvysddklerncyftlegvhev
fqeeglhtsiysfdetkdldledivrniqaservvimcassdtirsimlvahrhgmtsgd
yaffnielfnsssygdgswkrgdkhdfeakqaysslqtvtllrtvkpefekfsmevkssv
ekqglnmedyvnmfvegfhdaillyvlalhevlragyskkdggkiiqqtwnrtfegiagq
vsidangdrygdfsviamtdveagtqevigdyfgkegrfemrpnvkypwgplklridenr
ivehtnsspckscgleesavt

    Sequence, based on observed residues (ATOM records): (download) 
    >1jdpB (B:)
alppqkievlvllpqddsylfsltrvrpaieyalrsvegrllppgtrfqvayedsdcgnr
alfslvdrvaaargakpdlilgpvceyaaapvarlashwdlpmlsagalaagfqhkdsey
shltrvapayakmgemmlalfrhhhwsraalvysddklerncyftlegvhevfqeeglht
siysfdetkdldledivrniqaservvimcassdtirsimlvahrhgmtsgdyaffniel
fnsssygdgswkrgdkhdfeakqaysslqtvtllrtvkpefekfsmevkssvekqglnme
dyvnmfvegfhdaillyvlalhevlragyskkdggkiiqqtwnrtfegiagqvsidangd
rygdfsviamtdveagtqevigdyfgkegrfemrp

  • Chain 'H':
    No sequence available.