PDB entry 1j59

View 1j59 on RCSB PDB site
Description: catabolite gene activator protein (cap)/DNA complex + adenosine-3',5'-cyclic-monophosphate
Class: gene regulation/DNA
Keywords: protein-DNA complex, gene-regulatory, gene regulation/DNA complex
Deposited on 2002-03-01, released 2002-03-01
The last revision prior to the SCOPe 2.04 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.199
AEROSPACI score: 0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: catabolite gene activator protein (cap)
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d1j59a1, d1j59a2
  • Chain 'B':
    Compound: catabolite gene activator protein (cap)
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d1j59b1, d1j59b2
  • Chain 'C':
    Compound: 5'-d(*gp*cp*gp*ap*ap*ap*ap*gp*tp*gp*tp*gp*ap*c)-3'
  • Chain 'D':
    Compound: 5'-d(*ap*tp*ap*tp*gp*tp*cp*ap*cp*ap*cp*tp*tp*tp*tp*cp*g )-3'
  • Chain 'E':
    Compound: 5'-d(*gp*cp*gp*ap*ap*ap*ap*gp*tp*gp*tp*gp*ap*c)-3'
  • Chain 'F':
    Compound: 5'-d(*ap*tp*ap*tp*gp*tp*cp*ap*cp*ap*cp*tp*tp*tp*tp*cp*g )-3'
  • Heterogens: CMP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1j59A (A:)
vlgkpqtdptlewflshchihkypskstlihqgekaetlyyivkgsvavlikdeegkemi
lsylnqgdfigelglfeegqersawvraktacevaeisykkfrqliqvnpdilmrlsaqm
arrlqvtsekvgnlafldvtgriaqtllnlakqpdamthpdgmqikitrqeigqivgcsr
etvgrilkmledqnlisahgktivvygtr

    Sequence, based on observed residues (ATOM records): (download) 
    >1j59A (A:)
ptlewflshchihkypskstlihqgekaetlyyivkgsvavlikdeegkemilsylnqgd
figelglfeegqersawvraktacevaeisykkfrqliqvnpdilmrlsaqmarrlqvts
ekvgnlafldvtgriaqtllnlakqpdamthpdgmqikitrqeigqivgcsretvgrilk
mledqnlisahgktivvyg

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1j59B (B:)
vlgkpqtdptlewflshchihkypskstlihqgekaetlyyivkgsvavlikdeegkemi
lsylnqgdfigelglfeegqersawvraktacevaeisykkfrqliqvnpdilmrlsaqm
arrlqvtsekvgnlafldvtgriaqtllnlakqpdamthpdgmqikitrqeigqivgcsr
etvgrilkmledqnlisahgktivvygtr

    Sequence, based on observed residues (ATOM records): (download) 
    >1j59B (B:)
ptlewflshchihkypskstlihqgekaetlyyivkgsvavlikdeegkemilsylnqgd
figelglfeegqersawvraktacevaeisykkfrqliqvnpdilmrlsaqmarrlqvts
ekvgnlafldvtgriaqtllnlakqpdamthpdgmqikitrqeigqivgcsretvgrilk
mledqnlisahgktivv

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.

  • Chain 'E':
    No sequence available.

  • Chain 'F':
    No sequence available.