PDB entry 1iok

View 1iok on RCSB PDB site
Description: crystal structure of chaperonin-60 from paracoccus denitrificans
Class: chaperone
Keywords: chaperonin, CHAPERONE
Deposited on 2001-03-16, released 2001-10-03
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 3.2 Å
R-factor: 0.204
AEROSPACI score: 0.17 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: chaperonin 60
    Species: Paracoccus denitrificans [TaxId:266]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1ioka1, d1ioka2, d1ioka3
  • Chain 'B':
    Compound: chaperonin 60
    Species: Paracoccus denitrificans [TaxId:266]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1iokb1, d1iokb2, d1iokb3
  • Chain 'C':
    Compound: chaperonin 60
    Species: Paracoccus denitrificans [TaxId:266]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1iokc1, d1iokc2, d1iokc3
  • Chain 'D':
    Compound: chaperonin 60
    Species: Paracoccus denitrificans [TaxId:266]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1iokd1, d1iokd2, d1iokd3
  • Chain 'E':
    Compound: chaperonin 60
    Species: Paracoccus denitrificans [TaxId:266]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1ioke1, d1ioke2, d1ioke3
  • Chain 'F':
    Compound: chaperonin 60
    Species: Paracoccus denitrificans [TaxId:266]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1iokf1, d1iokf2, d1iokf3
  • Chain 'G':
    Compound: chaperonin 60
    Species: Paracoccus denitrificans [TaxId:266]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1iokg1, d1iokg2, d1iokg3

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1iokA (A:)
maakevkfnsdardrmlkgvniladavkvtlgpkgrnvvidksfgapritkdgvsvakei
elsdkfenmgaqmvrevasrtndeagdgtttatvlaqaivreglkavaagmnpmdlkrgi
dvatakvveaiksaarpvndssevaqvgtisangesfigqqiaeamqrvgnegvitveen
kgmetevevvegmqfdrgylspyfvtnadkmiaeledayillhekklsslqpmvpllesv
iqsqkpllivaedvegealatlvvnklrgglkiaavkapgfgdrrkamlqdiailtggqv
isedlgmklenvtidmlgrakkvsinkdnttivdgagekaeiearvsqirqqieettsdy
dreklqervaklaggvavirvggmteievkerkdrvddalnatraavqegivvgggvalv
qgakvleglsgansdqdagiaiirraleapmrqiaenagvdgavvagkvressdkafgfn
aqteeygdmfkfgvidpakvvrtaledaasvagllitteamiaekpepkapaggmpdmgg
mggmm

    Sequence, based on observed residues (ATOM records): (download) 
    >1iokA (A:)
aakevkfnsdardrmlkgvniladavkvtlgpkgrnvvidksfgapritkdgvsvakeie
lsdkfenmgaqmvrevasrtndeagdgtttatvlaqaivreglkavaagmnpmdlkrgid
vatakvveaiksaarpvndssevaqvgtisangesfigqqiaeamqrvgnegvitveenk
gmetevevvegmqfdrgylspyfvtnadkmiaeledayillhekklsslqpqkpllivae
dveiaavkapgfgdrrkamlqdiailtggidmlgrakkvsinkdnttivdgagekaeiea
rvsqirqqieettsdydreklqervaklaggvavirvggmteievkerkdrvddalnatr
aavqegivvgggvalvqgakvleglsgansdqdagiaiirraleapmrqiaenagvdgav
vagkvressdkafgfnaqteeygdmfkfgvidpakvvrtaledaasvagllitteamiae
kp

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1iokB (B:)
maakevkfnsdardrmlkgvniladavkvtlgpkgrnvvidksfgapritkdgvsvakei
elsdkfenmgaqmvrevasrtndeagdgtttatvlaqaivreglkavaagmnpmdlkrgi
dvatakvveaiksaarpvndssevaqvgtisangesfigqqiaeamqrvgnegvitveen
kgmetevevvegmqfdrgylspyfvtnadkmiaeledayillhekklsslqpmvpllesv
iqsqkpllivaedvegealatlvvnklrgglkiaavkapgfgdrrkamlqdiailtggqv
isedlgmklenvtidmlgrakkvsinkdnttivdgagekaeiearvsqirqqieettsdy
dreklqervaklaggvavirvggmteievkerkdrvddalnatraavqegivvgggvalv
qgakvleglsgansdqdagiaiirraleapmrqiaenagvdgavvagkvressdkafgfn
aqteeygdmfkfgvidpakvvrtaledaasvagllitteamiaekpepkapaggmpdmgg
mggmm

    Sequence, based on observed residues (ATOM records): (download) 
    >1iokB (B:)
aakevkfnsdardrmlkgvniladavkvtlgpkgrnvvidksfgapritkdgvsvakeie
lsdkfenmgaqmvrevasrtndeagdgtttatvlaqaivreglkavaagmnpmdlkrgid
vatakvveaiksaarpvndssevaqvgtisangesfigqqiaeamqrvgnegvitveenk
gmetevevvegmqfdrgylspyfvtnadkmiaeledayillhekklsslqpqkpllivae
dveiaavkapgfgdrrkamlqdiailtggidmlgrakkvsinkdnttivdgagekaeiea
rvsqirqqieettsdydreklqervaklaggvavirvggmteievkerkdrvddalnatr
aavqegivvgggvalvqgakvleglsgansdqdagiaiirraleapmrqiaenagvdgav
vagkvressdkafgfnaqteeygdmfkfgvidpakvvrtaledaasvagllitteamiae
kp

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1iokC (C:)
maakevkfnsdardrmlkgvniladavkvtlgpkgrnvvidksfgapritkdgvsvakei
elsdkfenmgaqmvrevasrtndeagdgtttatvlaqaivreglkavaagmnpmdlkrgi
dvatakvveaiksaarpvndssevaqvgtisangesfigqqiaeamqrvgnegvitveen
kgmetevevvegmqfdrgylspyfvtnadkmiaeledayillhekklsslqpmvpllesv
iqsqkpllivaedvegealatlvvnklrgglkiaavkapgfgdrrkamlqdiailtggqv
isedlgmklenvtidmlgrakkvsinkdnttivdgagekaeiearvsqirqqieettsdy
dreklqervaklaggvavirvggmteievkerkdrvddalnatraavqegivvgggvalv
qgakvleglsgansdqdagiaiirraleapmrqiaenagvdgavvagkvressdkafgfn
aqteeygdmfkfgvidpakvvrtaledaasvagllitteamiaekpepkapaggmpdmgg
mggmm

    Sequence, based on observed residues (ATOM records): (download) 
    >1iokC (C:)
aakevkfnsdardrmlkgvniladavkvtlgpkgrnvvidksfgapritkdgvsvakeie
lsdkfenmgaqmvrevasrtndeagdgtttatvlaqaivreglkavaagmnpmdlkrgid
vatakvveaiksaarpvndssevaqvgtisangesfigqqiaeamqrvgnegvitveenk
gmetevevvegmqfdrgylspyfvtnadkmiaeledayillhekklsslqpqkpllivae
dveiaavkapgfgdrrkamlqdiailtggidmlgrakkvsinkdnttivdgagekaeiea
rvsqirqqieettsdydreklqervaklaggvavirvggmteievkerkdrvddalnatr
aavqegivvgggvalvqgakvleglsgansdqdagiaiirraleapmrqiaenagvdgav
vagkvressdkafgfnaqteeygdmfkfgvidpakvvrtaledaasvagllitteamiae
kp

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1iokD (D:)
maakevkfnsdardrmlkgvniladavkvtlgpkgrnvvidksfgapritkdgvsvakei
elsdkfenmgaqmvrevasrtndeagdgtttatvlaqaivreglkavaagmnpmdlkrgi
dvatakvveaiksaarpvndssevaqvgtisangesfigqqiaeamqrvgnegvitveen
kgmetevevvegmqfdrgylspyfvtnadkmiaeledayillhekklsslqpmvpllesv
iqsqkpllivaedvegealatlvvnklrgglkiaavkapgfgdrrkamlqdiailtggqv
isedlgmklenvtidmlgrakkvsinkdnttivdgagekaeiearvsqirqqieettsdy
dreklqervaklaggvavirvggmteievkerkdrvddalnatraavqegivvgggvalv
qgakvleglsgansdqdagiaiirraleapmrqiaenagvdgavvagkvressdkafgfn
aqteeygdmfkfgvidpakvvrtaledaasvagllitteamiaekpepkapaggmpdmgg
mggmm

    Sequence, based on observed residues (ATOM records): (download) 
    >1iokD (D:)
aakevkfnsdardrmlkgvniladavkvtlgpkgrnvvidksfgapritkdgvsvakeie
lsdkfenmgaqmvrevasrtndeagdgtttatvlaqaivreglkavaagmnpmdlkrgid
vatakvveaiksaarpvndssevaqvgtisangesfigqqiaeamqrvgnegvitveenk
gmetevevvegmqfdrgylspyfvtnadkmiaeledayillhekklsslqpqkpllivae
dveiaavkapgfgdrrkamlqdiailtggidmlgrakkvsinkdnttivdgagekaeiea
rvsqirqqieettsdydreklqervaklaggvavirvggmteievkerkdrvddalnatr
aavqegivvgggvalvqgakvleglsgansdqdagiaiirraleapmrqiaenagvdgav
vagkvressdkafgfnaqteeygdmfkfgvidpakvvrtaledaasvagllitteamiae
kp

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >1iokE (E:)
maakevkfnsdardrmlkgvniladavkvtlgpkgrnvvidksfgapritkdgvsvakei
elsdkfenmgaqmvrevasrtndeagdgtttatvlaqaivreglkavaagmnpmdlkrgi
dvatakvveaiksaarpvndssevaqvgtisangesfigqqiaeamqrvgnegvitveen
kgmetevevvegmqfdrgylspyfvtnadkmiaeledayillhekklsslqpmvpllesv
iqsqkpllivaedvegealatlvvnklrgglkiaavkapgfgdrrkamlqdiailtggqv
isedlgmklenvtidmlgrakkvsinkdnttivdgagekaeiearvsqirqqieettsdy
dreklqervaklaggvavirvggmteievkerkdrvddalnatraavqegivvgggvalv
qgakvleglsgansdqdagiaiirraleapmrqiaenagvdgavvagkvressdkafgfn
aqteeygdmfkfgvidpakvvrtaledaasvagllitteamiaekpepkapaggmpdmgg
mggmm

    Sequence, based on observed residues (ATOM records): (download) 
    >1iokE (E:)
aakevkfnsdardrmlkgvniladavkvtlgpkgrnvvidksfgapritkdgvsvakeie
lsdkfenmgaqmvrevasrtndeagdgtttatvlaqaivreglkavaagmnpmdlkrgid
vatakvveaiksaarpvndssevaqvgtisangesfigqqiaeamqrvgnegvitveenk
gmetevevvegmqfdrgylspyfvtnadkmiaeledayillhekklsslqpqkpllivae
dveiaavkapgfgdrrkamlqdiailtggidmlgrakkvsinkdnttivdgagekaeiea
rvsqirqqieettsdydreklqervaklaggvavirvggmteievkerkdrvddalnatr
aavqegivvgggvalvqgakvleglsgansdqdagiaiirraleapmrqiaenagvdgav
vagkvressdkafgfnaqteeygdmfkfgvidpakvvrtaledaasvagllitteamiae
kp

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >1iokF (F:)
maakevkfnsdardrmlkgvniladavkvtlgpkgrnvvidksfgapritkdgvsvakei
elsdkfenmgaqmvrevasrtndeagdgtttatvlaqaivreglkavaagmnpmdlkrgi
dvatakvveaiksaarpvndssevaqvgtisangesfigqqiaeamqrvgnegvitveen
kgmetevevvegmqfdrgylspyfvtnadkmiaeledayillhekklsslqpmvpllesv
iqsqkpllivaedvegealatlvvnklrgglkiaavkapgfgdrrkamlqdiailtggqv
isedlgmklenvtidmlgrakkvsinkdnttivdgagekaeiearvsqirqqieettsdy
dreklqervaklaggvavirvggmteievkerkdrvddalnatraavqegivvgggvalv
qgakvleglsgansdqdagiaiirraleapmrqiaenagvdgavvagkvressdkafgfn
aqteeygdmfkfgvidpakvvrtaledaasvagllitteamiaekpepkapaggmpdmgg
mggmm

    Sequence, based on observed residues (ATOM records): (download) 
    >1iokF (F:)
aakevkfnsdardrmlkgvniladavkvtlgpkgrnvvidksfgapritkdgvsvakeie
lsdkfenmgaqmvrevasrtndeagdgtttatvlaqaivreglkavaagmnpmdlkrgid
vatakvveaiksaarpvndssevaqvgtisangesfigqqiaeamqrvgnegvitveenk
gmetevevvegmqfdrgylspyfvtnadkmiaeledayillhekklsslqpqkpllivae
dveiaavkapgfgdrrkamlqdiailtggidmlgrakkvsinkdnttivdgagekaeiea
rvsqirqqieettsdydreklqervaklaggvavirvggmteievkerkdrvddalnatr
aavqegivvgggvalvqgakvleglsgansdqdagiaiirraleapmrqiaenagvdgav
vagkvressdkafgfnaqteeygdmfkfgvidpakvvrtaledaasvagllitteamiae
kp

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >1iokG (G:)
maakevkfnsdardrmlkgvniladavkvtlgpkgrnvvidksfgapritkdgvsvakei
elsdkfenmgaqmvrevasrtndeagdgtttatvlaqaivreglkavaagmnpmdlkrgi
dvatakvveaiksaarpvndssevaqvgtisangesfigqqiaeamqrvgnegvitveen
kgmetevevvegmqfdrgylspyfvtnadkmiaeledayillhekklsslqpmvpllesv
iqsqkpllivaedvegealatlvvnklrgglkiaavkapgfgdrrkamlqdiailtggqv
isedlgmklenvtidmlgrakkvsinkdnttivdgagekaeiearvsqirqqieettsdy
dreklqervaklaggvavirvggmteievkerkdrvddalnatraavqegivvgggvalv
qgakvleglsgansdqdagiaiirraleapmrqiaenagvdgavvagkvressdkafgfn
aqteeygdmfkfgvidpakvvrtaledaasvagllitteamiaekpepkapaggmpdmgg
mggmm

    Sequence, based on observed residues (ATOM records): (download) 
    >1iokG (G:)
aakevkfnsdardrmlkgvniladavkvtlgpkgrnvvidksfgapritkdgvsvakeie
lsdkfenmgaqmvrevasrtndeagdgtttatvlaqaivreglkavaagmnpmdlkrgid
vatakvveaiksaarpvndssevaqvgtisangesfigqqiaeamqrvgnegvitveenk
gmetevevvegmqfdrgylspyfvtnadkmiaeledayillhekklsslqpqkpllivae
dveiaavkapgfgdrrkamlqdiailtggidmlgrakkvsinkdnttivdgagekaeiea
rvsqirqqieettsdydreklqervaklaggvavirvggmteievkerkdrvddalnatr
aavqegivvgggvalvqgakvleglsgansdqdagiaiirraleapmrqiaenagvdgav
vagkvressdkafgfnaqteeygdmfkfgvidpakvvrtaledaasvagllitteamiae
kp