PDB entry 1i8f

View 1i8f on RCSB PDB site
Description: the crystal structure of a heptameric archaeal sm protein: implications for the eukaryotic snrnp core
Class: structural genomics
Keywords: beta barrel-like SmAP monomers form 35-stranded beta-sheet in the heptamer, STRUCTURAL GENOMICS
Deposited on 2001-03-14, released 2001-05-16
The last revision prior to the SCOPe 2.07 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-25.
Experiment type: XRAY
Resolution: 1.75 Å
R-factor: 0.235
AEROSPACI score: 0.48 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: putative snrnp sm-like protein
    Species: Pyrobaculum aerophilum [TaxId:13773]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1i8fa_
  • Chain 'B':
    Compound: putative snrnp sm-like protein
    Species: Pyrobaculum aerophilum [TaxId:13773]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1i8fb_
  • Chain 'C':
    Compound: putative snrnp sm-like protein
    Species: Pyrobaculum aerophilum [TaxId:13773]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1i8fc1, d1i8fc2
  • Chain 'D':
    Compound: putative snrnp sm-like protein
    Species: Pyrobaculum aerophilum [TaxId:13773]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1i8fd1, d1i8fd2
  • Chain 'E':
    Compound: putative snrnp sm-like protein
    Species: Pyrobaculum aerophilum [TaxId:13773]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1i8fe_
  • Chain 'F':
    Compound: putative snrnp sm-like protein
    Species: Pyrobaculum aerophilum [TaxId:13773]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1i8ff1, d1i8ff2
  • Chain 'G':
    Compound: putative snrnp sm-like protein
    Species: Pyrobaculum aerophilum [TaxId:13773]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1i8fg_
  • Heterogens: GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1i8fA (A:)
masdiskcfatlgatlqdsigkqvlvklrdsheirgilrsfdqhvnllledaeeiidgnv
ykrgtmvvrgenvlfispvpg

    Sequence, based on observed residues (ATOM records): (download) 
    >1i8fA (A:)
atlgatlqdsigkqvlvklrdsheirgilrsfdqhvnllledaeeiidgnvykrgtmvvr
genvlfispvp

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1i8fB (B:)
masdiskcfatlgatlqdsigkqvlvklrdsheirgilrsfdqhvnllledaeeiidgnv
ykrgtmvvrgenvlfispvpg

    Sequence, based on observed residues (ATOM records): (download) 
    >1i8fB (B:)
fatlgatlqdsigkqvlvklrdsheirgilrsfdqhvnllledaeeiidgnvykrgtmvv
rgenvlfispvp

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1i8fC (C:)
masdiskcfatlgatlqdsigkqvlvklrdsheirgilrsfdqhvnllledaeeiidgnv
ykrgtmvvrgenvlfispvpg

    Sequence, based on observed residues (ATOM records): (download) 
    >1i8fC (C:)
atlqdsigkqvlvklrdsheirgilrsfdqhvnllledaeeiidgnvykrgtmvvrgenv
lfispvpg

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1i8fD (D:)
masdiskcfatlgatlqdsigkqvlvklrdsheirgilrsfdqhvnllledaeeiidgnv
ykrgtmvvrgenvlfispvpg

    Sequence, based on observed residues (ATOM records): (download) 
    >1i8fD (D:)
fatlgatlqdsigkqvlvklrdsheirgilrsfdqhvnllledaeeiidgnvykrgtmvv
rgenvlfispvpg

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >1i8fE (E:)
masdiskcfatlgatlqdsigkqvlvklrdsheirgilrsfdqhvnllledaeeiidgnv
ykrgtmvvrgenvlfispvpg

    Sequence, based on observed residues (ATOM records): (download) 
    >1i8fE (E:)
tlgatlqdsigkqvlvklrdsheirgilrsfdqhvnllledaeeiidgnvykrgtmvvrg
envlfispvp

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >1i8fF (F:)
masdiskcfatlgatlqdsigkqvlvklrdsheirgilrsfdqhvnllledaeeiidgnv
ykrgtmvvrgenvlfispvpg

    Sequence, based on observed residues (ATOM records): (download) 
    >1i8fF (F:)
iskcfatlgatlqdsigkqvlvklrdsheirgilrsfdqhvnllledaeeiidgnvykrg
tmvvrgenvlfispvpg

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >1i8fG (G:)
masdiskcfatlgatlqdsigkqvlvklrdsheirgilrsfdqhvnllledaeeiidgnv
ykrgtmvvrgenvlfispvpg

    Sequence, based on observed residues (ATOM records): (download) 
    >1i8fG (G:)
gatlqdsigkqvlvklrdsheirgilrsfdqhvnllledaeeiidgnvykrgtmvvrgen
vlfispvp