PDB entry 1i3q

View 1i3q on RCSB PDB site
Description: rna polymerase ii crystal form i at 3.1 a resolution
Deposited on 2001-02-15, released 2001-04-25
The last revision prior to the SCOP 1.59 freeze date was dated 2001-07-18, with a file datestamp of 2001-07-18.
Experiment type: XRAY
Resolution: 3.1 Å
R-factor: 0.229
AEROSPACI score: 0.21 (click here for full SPACI score report)

Chains and heterogens:

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >1i3qA (A:)
    vgqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsi
    drnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnel
    mrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglkl
    vgswkkdratgdadepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpv
    ppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhva
    tymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnlel
    dqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskra
    gdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynad
    fdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfi
    eldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspk
    dngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhng
    fstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrf
    lneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvd
    rtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrl
    vkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdl
    lntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnir
    riiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccl
    lrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtl
    ntfhfagvaskkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaieht
    tlksvtiaseiyydpdprstvipedeeiiqlhfslldeeaeqsfdqqspwllrleldraa
    mndkdltmgqvgerikqtfkndlfviwsedndekliircrvvrpksldaeteaeedhmlk
    kientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpg
    idptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggl
    tsvtrhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgaf
    dvmi
    

    Sequence, based on observed residues (ATOM records): (download)
    >1i3qA (A:)
    vgqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsi
    drnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnel
    mrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglkl
    vgswkkdratgdadepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpv
    ppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhva
    tymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnlel
    dqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskra
    gdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynad
    fdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfi
    eldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspk
    dngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhng
    fstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrf
    lneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvd
    rtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrl
    vkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdl
    lntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnir
    riiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccl
    lrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtl
    kkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiase
    iyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfk
    ndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkv
    psptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalyke
    vynviasdgsyvnyrhmallvdvmttqggltsvtrhgfnrsntgalmrcsfeetveilfe
    agasaelddcrgvsenvilgqmapigtgafdvmi
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >1i3qB (B:)
    desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstlileqlaqhtt
    esdnisrkyeisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkrtyea
    idvpgrelkyeliaeeseddsesgkvfigrlpimlrskncylseatesdlyklkecpfdm
    ggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvkly
    gregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcve
    dgfviqdretaldfigrrgtalgikkekriqyakdilqkeflphitqlegfesrkafflg
    yminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtveea
    hdfnmklainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtn
    tpigrdgklakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitfls
    ewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdi
    rekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdieggfedveey
    twssllneglveyidaeeeesiliamqpedlepaeaneendldvdpakrirvshhattft
    hceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyyp
    qkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsy
    mdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpis
    pdeeelgqrtayhskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdk
    fasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsg
    negdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmv
    ddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafr
    vhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytd
    rsrdf
    

    Sequence, based on observed residues (ATOM records): (download)
    >1i3qB (B:)
    desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstlieisfgkiyv
    tkpmvnesdgvthalypqearlrnltyssglfvdvkkrtyekvfigrlpimlrskncyls
    eatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirs
    alekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehic
    ydvndwqmlemlkpcvedgfviqdretaldfigkekriqyakdilqkeflphitqlegfe
    srkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifry
    mqrtvelainaktitsglkyalatgnwgagvsqvlnrytysstlshlrrtntpiakprql
    hnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqs
    pdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvy
    rplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesili
    amqpedlepdvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsa
    mgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysg
    ynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydk
    ldddgliapgvrvsgedviigkttpisskrdastplrstengivdqvlvttnqdglkfvk
    vrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvah
    liecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqi
    ffgptyyqrlrhmvddkiharargpglrfgemerdcmiahgaasflkerlmeasdafrvh
    icgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrs
    rdf
    

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1i3qC (C:)
    eegpqvkireaskdnvdfilsnvdlamanslrrvmiaeiptlaidsvevetnttvladef
    iahrlgliplqsmdieqleysrdcfcedhcdkcsvvltlqafgesesttnvyskdlvivs
    nlmgrnighpiiqdkegngvlicklrkgqelkltcvakkgiakehakwgpaaaiefeydp
    wnklkhtdywyeqdsakewpqsknceyedppnegdpfdykaqadtfymnvesvgsipvdq
    vvvrgidtlqkkvasillaltqmdqd
    

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1i3qE (E:)
    mdqenernisrlwrafrtvkemvkdrgyfitqeevelpledfkakycdsmgrpqrkmmsf
    qanpteesiskfpdmgslwvefcdepsvgvktmktfvihiqeknfqtgifvyqnnitpsa
    mklvpsippatietfneaalvvnithhelvpkhirlssdekrellkryrlkesqlpriqr
    adpvalylglkrgevvkiirksetsgryasyricm
    

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1i3qF (F:)
    kaipkdqrattpymtkyerarilgtralqismnapvfvdlegetdplriamkelaekkip
    lvirrylpdgsfedwsveelivdl
    

  • Chain 'H':
    Sequence, based on SEQRES records: (download)
    >1i3qH (H:)
    sntlfddifqvsevdpgrynkvcrieaasttqdqckltldinvelfpvaaqdsltvtias
    slnledtpandssatrswrppqagdrsladdydyvmygtaykfeevskdliavyysfggl
    lmrlegnyrnlnnlkqenayllirr
    

    Sequence, based on observed residues (ATOM records): (download)
    >1i3qH (H:)
    sntlfddifqvsevdpgrynkvcrieaasttqdqckltldinvelfpvaaqdsltvtias
    sltrswrppqagdrsladdydyvmygtaykfeevskdliavyysfggllmrlegnyrnln
    nlkqenayllirr
    

  • Chain 'I':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1i3qI (I:)
    mttfrfcrdcnnmlypredkennrllfecrtcsyveeagsplvyrhelitnigetagvvq
    digsdptlprsdrecpkchsrenvffqsqqrrkdtsmvlffvclscshiftsdqknkrtq
    fs
    

  • Chain 'J':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1i3qJ (J:)
    mivpvrcfscgkvvgdkwesylnllqedeldegtalsrlglkryccrrmilthvdliekf
    lrynp
    

  • Chain 'K':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1i3qK (K:)
    mnapdrfelfllgegesklkidpdtkapnavvitfekedhtlgnliraellndrkvlfaa
    ykvehpffarfklriqttegydpkdalknacnsiinklgalktnfetewnlqtl
    

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1i3qL (L:)
    atlkyicaecssklslsrtdavrckdcghrillkartkrlvqfear