PDB entry 1hys
View 1hys on RCSB PDB site
Description: crystal structure of hiv-1 reverse transcriptase in complex with a polypurine tract RNA:DNA
Class: transferase/DNA/RNA
Keywords: polypurine tract, PPT, protein-nucleic acid complex, RNase H, RNA:DNA, unpaired base, RNase H primer grip
Deposited on
2001-01-22, released
2001-03-26
The last revision prior to the SCOP 1.75 freeze date was dated
2003-09-30, with a file datestamp of
2007-06-04.
Experiment type: XRAY
Resolution: 3 Å
R-factor: 0.274
AEROSPACI score: 0.08
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: hiv-1 reverse transcriptase
Species: Human immunodeficiency virus 1
Gene: pol
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.75: d1hysa1, d1hysa2 - Chain 'B':
Compound: hiv-1 reverse transcriptase
Species: Human immunodeficiency virus 1
Gene: pol
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.75: d1hysb_ - Chain 'C':
Compound: fab-28 monoclonal antibody fragment light chain
Species: MUS MUSCULUS
Domains in SCOP 1.75: d1hysc1, d1hysc2 - Chain 'D':
Compound: fab-28 monoclonal antibody fragment heavy chain
Species: MUS MUSCULUS
Domains in SCOP 1.75: d1hysd1, d1hysd2 - Chain 'E':
Compound: 5'-r(*up*cp*ap*gp*cp*cp*ap*cp*up*up*up*up*up*ap*ap*ap*ap*gp*ap*ap*ap*ap*g)-3'
- Chain 'F':
Compound: 5'-d(*cp*tp*tp*tp*tp*cp*tp*tp*tp*tp*ap*ap*ap*ap*ap*gp*tp*gp*gp*cp*tp*g)-3'
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>1hysA (A:)
pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpv
faikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaglkkkksvtvldvgdayfsvpl
dedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdivi
yqymddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwt
vqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeae
lelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrga
htndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntp
plvklwyqlekepivgaetfyvdgaanretklgkagyvtnkgrqkvvpltnttnqktelq
aiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahk
giggneqvdklvs
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>1hysB (B:)
pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpv
faikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaglkkkksvtvldvgdayfsvpl
dedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdivi
yqymddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwt
vqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeae
lelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrga
htndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntp
plvkl
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>1hysC (C:)
diqmtqttsslsaslgdrvtiscsasqdissylnwyqqkpegtvklliyytsslhsgvps
afsgsgsgtdysltisnlepedfatyycqqyskfpwtfgggtkleikradaaptvsifpp
sseqltsggasvvcflnnfypkdinvawaidgsaaangvlnswtdqdskdstysmsstlt
ltadayeaansytcaathktstspivksfnanec
- Chain 'D':
Sequence; same for both SEQRES and ATOM records: (download)
>1hysD (D:)
qitlkesgpgivqpsqpfrltctfsgfslstsgigvtwirqpsgkglewlatiwwdddnr
ynpslksrltvskdtsnnqaflnmmtvetadtaiyycaqsaitsvtdsamdhwgqgtsvt
vssaattppsvyplapgsaaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavl
qsdlytlsssvtvpsstwpsetvtcnvahpasstkvdkki
- Chain 'E':
No sequence available.
- Chain 'F':
No sequence available.