PDB entry 1hy5
View 1hy5 on RCSB PDB site
Description: crystal structure of the catalytic domain of yope-yersinia pestis gap effector protein.
Class: toxin
Keywords: four helix up-down-up-down antiparallel bundle, beta hairpin, arginine finger, toxin
Deposited on
2001-01-18, released
2002-02-06
The last revision prior to the SCOPe 2.08 freeze date was dated
2009-02-24, with a file datestamp of
2009-02-03.
Experiment type: XRAY
Resolution: 2.25 Å
R-factor: 0.198
AEROSPACI score: 0.34
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: yersinia pestis virulence protein yope
Species: Yersinia pestis [TaxId:632]
Gene: YOPE
Database cross-references and differences (RAF-indexed):
- Uniprot P31493
- modified residue (28)
- modified residue (38)
- modified residue (64)
- modified residue (122)
- modified residue (129)
Domains in SCOPe 2.08: d1hy5a_ - Chain 'B':
Compound: yersinia pestis virulence protein yope
Species: Yersinia pestis [TaxId:632]
Gene: YOPE
Database cross-references and differences (RAF-indexed):
- Uniprot P31493 (Start-129)
- modified residue (28)
- modified residue (38)
- modified residue (64)
- modified residue (122)
- modified residue (129)
- expression tag (130)
Domains in SCOPe 2.08: d1hy5b1, d1hy5b2 - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1hy5A (A:)
aptpaqmpsptsfsdsikqlaaetlpkymqqlnsldaemlqknhdqfatgsgplrgsitq
cqglmqfcggelqaeasailntpvcgipfsqwgtiggaasayvasgvdltqaaneikgla
qqmqkllslmhhhhhh
Sequence, based on observed residues (ATOM records): (download)
>1hy5A (A:)
tsfsdsikqlaaetlpkymqqlnsldaemlqknhdqfatgsgplrgsitqcqglmqfcgg
elqaeasailntpvcgipfsqwgtiggaasayvasgvdltqaaneikglaqqmqkllslm
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1hy5B (B:)
aptpaqmpsptsfsdsikqlaaetlpkymqqlnsldaemlqknhdqfatgsgplrgsitq
cqglmqfcggelqaeasailntpvcgipfsqwgtiggaasayvasgvdltqaaneikgla
qqmqkllslmhhhhhh
Sequence, based on observed residues (ATOM records): (download)
>1hy5B (B:)
tsfsdsikqlaaetlpkymqqlnsldaemlqknhdqfatgsgplrgsitqcqglmqfcgg
elqaeasailntpvcgipfsqwgtiggaasayvasgvdltqaaneikglaqqmqkllslm
h