PDB entry 1hi6

View 1hi6 on RCSB PDB site
Description: anti-p24 (hiv-1) fab fragment cb41 complexed with a peptide
Class: immune system/peptide
Keywords: immune system/peptide, complex (antibody/peptide), polyspecificity, crossreactivity, fab-fragment, peptide, hiv-1
Deposited on 2001-01-02, released 2001-02-08
The last revision prior to the SCOPe 2.04 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2.55 Å
R-factor: 0.284
AEROSPACI score: 0.21 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: igg2a kappa antibody cb41 (light chain)
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 1HI6 (0-11)
    Domains in SCOPe 2.04: d1hi6a1, d1hi6a2
  • Chain 'B':
    Compound: igg2a kappa antibody cb41 (heavy chain)
    Species: Mus musculus [TaxId:10090]
    Domains in SCOPe 2.04: d1hi6b1, d1hi6b2
  • Chain 'C':
    Compound: peptide 5
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1hi6A (A:)
dikmtqspssmytslgervtitckasqdinsfltwflqkpgkspktliyranrlmigvps
rfsgsgsgqtysltissleyedmgiyyclqyddfpltfgagtkldlkradaaptvsifpp
sseqltsggasvvcflnnfypkeinvkwkidgserqngvldswteqdskdstysmsstlt
ltkdeyerhnsytceathktstspivksfnrnec

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1hi6B (B:)
qdqlqqsgaelvrpgasvklsckalgyiftdyeihwvkqtpvhglewiggihpgssgtay
nqkfkgkatltadkssttafmelssltsedsavyyctrkdywgqgtlvtvsaakttapsv
yplvpvcggttgssvtlgclvkgyfpepvtltwnsgslssgvhtfpallqsglytlsssv
tvtsntwpsqtitcnvahpasstkvdkkieprv

  • Chain 'C':
    No sequence available.