PDB entry 1gt0
View 1gt0 on RCSB PDB site
Description: Crystal structure of a POU/HMG/DNA ternary complex
Class: transcription
Keywords: transcription factor, pou factors, sox proteins, transcription
Deposited on
2002-01-09, released
2003-01-30
The last revision prior to the SCOPe 2.08 freeze date was dated
2019-07-24, with a file datestamp of
2019-07-19.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: N/A
AEROSPACI score: 0.19
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: 5'-d(*tp*tp*cp*tp*tp*tp*gp*tp*tp*tp* gp*gp*ap* tp*gp*cp*tp*ap*ap*tp*gp*gp*gp*a)-3'
Species: MUS MUSCULUS, synthetic [TaxId:10090]
- Chain 'B':
Compound: 5'-d(*ap*tp*cp*cp*cp*ap*tp*tp*ap*gp* cp*ap*tp*cp*cp*ap*ap*ap*cp*ap*ap*ap*gp*a)-3'
Species: MUS MUSCULUS, synthetic [TaxId:10090]
- Chain 'C':
Compound: octamer-binding transcription factor 1
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Uniprot P14859
- engineered mutation (60)
- engineered mutation (148)
Domains in SCOPe 2.08: d1gt0c1, d1gt0c2 - Chain 'D':
Compound: transcription factor sox-2
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1gt0d_ - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
No sequence available.
- Chain 'B':
No sequence available.
- Chain 'C':
Sequence, based on SEQRES records: (download)
>1gt0C (C:)
eepsdleeleqfaktfkqrriklgftqgdvglamgklygndfsqttisrfealnlsfknm
sklkpllekwlndaenlssdsslsspsalnspgieglsrrrkkrtsietnirvaleksfl
enqkptseeitmiadqlnmekevirvwfsnrrqkekrin
Sequence, based on observed residues (ATOM records): (download)
>1gt0C (C:)
psdleeleqfaktfkqrriklgftqgdvglamgklygndfsqttisrfealnlsfknmsk
lkpllekwlndaenlglsrrrkkrtsietnirvaleksflenqkptseeitmiadqlnme
kevirvwfsnrrqkekri
- Chain 'D':
Sequence; same for both SEQRES and ATOM records: (download)
>1gt0D (D:)
drvkrpmnafmvwsrgqrrkmaqenpkmhnseiskrlgaewkllsetekrpfideakrlr
alhmkehpdykyrprrktkt