PDB entry 1fve
View 1fve on RCSB PDB site
Description: x-ray structures of the antigen-binding domains from three variants of humanized anti-p185-her2 antibody 4d5 and comparison with molecular modeling
Class: immunoglobulin
Keywords: immunoglobulin
Deposited on
1992-10-20, released
1993-10-31
The last revision prior to the SCOPe 2.03 freeze date was dated
2009-08-25, with a file datestamp of
2009-08-21.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: 0.171
AEROSPACI score: 0.29
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: igg1-kappa 4d5 fab (light chain)
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- EMBL CAA65061 (3-213)
- conflict (13)
- conflict (27-33)
- conflict (49)
- conflict (52)
- conflict (54)
- conflict (65)
- conflict (90-92)
- conflict (95)
- conflict (102-103)
Domains in SCOPe 2.03: d1fvea1, d1fvea2 - Chain 'B':
Compound: igg1-kappa 4d5 fab (heavy chain)
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- EMBL CAA75030 (1-222)
- conflict (27-33)
- conflict (42)
- conflict (45)
- conflict (48)
- conflict (51)
- conflict (53-56)
- conflict (58)
- conflict (62)
- conflict (71)
- conflict (73-74)
- conflict (78)
- conflict (84)
- conflict (96)
- insertion (98-99)
- conflict (101-102)
- conflict (104-105)
- conflict (108)
Domains in SCOPe 2.03: d1fveb1, d1fveb2 - Chain 'C':
Compound: igg1-kappa 4d5 fab (light chain)
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- EMBL CAA65061 (3-213)
- conflict (13)
- conflict (27-33)
- conflict (49)
- conflict (52)
- conflict (54)
- conflict (65)
- conflict (90-92)
- conflict (95)
- conflict (102-103)
Domains in SCOPe 2.03: d1fvec1, d1fvec2 - Chain 'D':
Compound: igg1-kappa 4d5 fab (heavy chain)
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- EMBL CAA75030 (1-222)
- conflict (27-33)
- conflict (42)
- conflict (45)
- conflict (48)
- conflict (51)
- conflict (53-56)
- conflict (58)
- conflict (62)
- conflict (71)
- conflict (73-74)
- conflict (78)
- conflict (84)
- conflict (96)
- insertion (98-99)
- conflict (101-102)
- conflict (104-105)
- conflict (108)
Domains in SCOPe 2.03: d1fved1, d1fved2 - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>1fveA (A:)
diqmtqspsslsasvgdrvtitcrasqdvntavawyqqkpgkapklliysasflesgvps
rfsgsrsgtdftltisslqpedfatyycqqhyttpptfgqgtkveikrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhkvyacevthqglsspvtksfnrgec
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>1fveB (B:)
evqlvesggglvqpggslrlscaasgfnikdtyihwvrqapgkglewvariyptngytry
adsvkgrftisadtskntaylqmnslraedtavyycsrwggdgfyamdywgqgtlvtvss
astkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqss
glyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepksc
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>1fveC (C:)
diqmtqspsslsasvgdrvtitcrasqdvntavawyqqkpgkapklliysasflesgvps
rfsgsrsgtdftltisslqpedfatyycqqhyttpptfgqgtkveikrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhkvyacevthqglsspvtksfnrgec
- Chain 'D':
Sequence; same for both SEQRES and ATOM records: (download)
>1fveD (D:)
evqlvesggglvqpggslrlscaasgfnikdtyihwvrqapgkglewvariyptngytry
adsvkgrftisadtskntaylqmnslraedtavyycsrwggdgfyamdywgqgtlvtvss
astkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqss
glyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepksc