PDB entry 1ft8

View 1ft8 on RCSB PDB site
Description: crystal structure of the RNA-binding domain of the mRNA export factor tap
Class: RNA binding protein
Keywords: ribonucleoprotein (RNP, RRM, RBD) and leucine-rich-repeat (LRR) domains, RNA BINDING PROTEIN
Deposited on 2000-09-12, released 2000-12-11
The last revision prior to the SCOPe 2.06 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 3.15 Å
R-factor: 0.303
AEROSPACI score: -1.87 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: tip associating protein
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9UBU9
      • engineered (17)
      • engineered (124)
    Domains in SCOPe 2.06: d1ft8a1, d1ft8a2
  • Chain 'B':
    Compound: tip associating protein
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9UBU9
      • engineered (124)
    Domains in SCOPe 2.06: d1ft8b_
  • Chain 'C':
    Compound: tip associating protein
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9UBU9
      • engineered (17)
      • engineered (124)
    Domains in SCOPe 2.06: d1ft8c1, d1ft8c2
  • Chain 'D':
    Compound: tip associating protein
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9UBU9
      • engineered (124)
    Domains in SCOPe 2.06: d1ft8d_
  • Chain 'E':
    Compound: tip associating protein
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9UBU9
      • engineered (17)
    Domains in SCOPe 2.06: d1ft8e_

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1ft8A (A:)
pperggagtsqdgtsknwfkitipygrkydkawllsmiqskcsvpftpiefhyentraqf
fvedastasalkavnykildrenrrisiiinssapphtilnelkpeqveqlklimskryd
gsqqvldlkglrsdpdlvaqnidvvlnrrscmaatlriieenipellslnlsnnrlyrld
dmssivqkapnlkilnlsgnelksereldkikglkleelwldgnslcdtfrdqstyisai
rerfpkllrldghelpppiafdveapttlpp

    Sequence, based on observed residues (ATOM records): (download) 
    >1ft8A (A:)
nwfkitipygrkydkawllsmiqskcsvpftpiefhyentraqffvedastasalkavny
kildrenrrisiiinssapphtelkpeqveqlklimskrydgsqqvldlkglrsdpdlva
qnidvvlnrrscmaatlriieenipellslnlsnnrlyrlddmssivqkapnlkilnlsg
nelksereldkikglkleelwldgnslcdtfrdqstyisairerfpkllrldghelpppi
af

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1ft8B (B:)
pperggagtsqdgtsknwfkitipygrkydkawllsmiqskcsvpftpiefhyentraqf
fvedastasalkavnykildrenrrisiiinssapphtilnelkpeqveqlklimskryd
gsqqvldlkglrsdpdlvaqnidvvlnrrscmaatlriieenipellslnlsnnrlyrld
dmssivqkapnlkilnlsgnelksereldkikglkleelwldgnslcdtfrdqstyisai
rerfpkllrldghelpppiafdveapttlpp

    Sequence, based on observed residues (ATOM records): (download) 
    >1ft8B (B:)
elkpeqveqlklimskrydgsqqvldlkglrsdpdlvaqnidvvlnrrscmaatlriiee
nipellslnlsnnrlyrlddmssivqkapnlkilnlsgnelksereldkikglkleelwl
dgnslcdtfrdqstyisairerfpkllrldghelpppiafdveap

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1ft8C (C:)
pperggagtsqdgtsknwfkitipygrkydkawllsmiqskcsvpftpiefhyentraqf
fvedastasalkavnykildrenrrisiiinssapphtilnelkpeqveqlklimskryd
gsqqvldlkglrsdpdlvaqnidvvlnrrscmaatlriieenipellslnlsnnrlyrld
dmssivqkapnlkilnlsgnelksereldkikglkleelwldgnslcdtfrdqstyisai
rerfpkllrldghelpppiafdveapttlpp

    Sequence, based on observed residues (ATOM records): (download) 
    >1ft8C (C:)
knwfkitipygrkydkawllsmiqskcsvpftpiefhyentraqffvedastasalkavn
ykildrenrrisiiinssapphlnelkpeqveqlklimskrydgsqqvldlkglrsdpdl
vaqnidvvlnrrscmaatlriieenipellslnlsnnrlyrlddmssivqkapnlkilnl
sgnelksereldkikglkleelwldgnslcdtfrdqstyisairerfpkllrldghelpp
piaf

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1ft8D (D:)
pperggagtsqdgtsknwfkitipygrkydkawllsmiqskcsvpftpiefhyentraqf
fvedastasalkavnykildrenrrisiiinssapphtilnelkpeqveqlklimskryd
gsqqvldlkglrsdpdlvaqnidvvlnrrscmaatlriieenipellslnlsnnrlyrld
dmssivqkapnlkilnlsgnelksereldkikglkleelwldgnslcdtfrdqstyisai
rerfpkllrldghelpppiafdveapttlpp

    Sequence, based on observed residues (ATOM records): (download) 
    >1ft8D (D:)
lkpeqveqlklimskrydgsqqvldlkglrsdpdlvaqnidvvlnrrscmaatlriieen
ipellslnlsnnrlyrlddmssivqkapnlkilnlsgnelksereldkikglkleelwld
gnslcdtfrdqstyisairerfpkllrldghelpppiafdve

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >1ft8E (E:)
pperggagtsqdgtsknwfkitipygrkydkawllsmiqskcsvpftpiefhyentraqf
fvedastasalkavnykildrenrrisiiinssapphtilnelkpeqveqlklimskryd
gsqqvldlkglrsdpdlvaqnidvvlnrrscmaatlriieenipellslnlsnnrlyrld
dmssivqkapnlkilnlsgnelksereldkikglkleelwldgnslcdtfrdqstyisai
rerfpkllrldghelpppiafdveapttlpp

    Sequence, based on observed residues (ATOM records): (download) 
    >1ft8E (E:)
wfkitdkawllsmiqskcsvpftpiefhqffvedastasalkav