PDB entry 1fj1
View 1fj1 on RCSB PDB site
Description: lyme disease antigen ospa in complex with neutralizing antibody fab la-2
Class: immune system
Keywords: ospa, lyme disease, antibody fab fragment, neutralizing epitope, immune system
Deposited on
2000-08-07, released
2000-10-11
The last revision prior to the SCOPe 2.04 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-08.
Experiment type: XRAY
Resolution: 2.68 Å
R-factor: 0.226
AEROSPACI score: 0.26
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: hybridoma antibody la2 (light chain)
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d1fj1a1, d1fj1a2 - Chain 'B':
Compound: hybridoma antibody la2 (heavy chain)
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d1fj1b1, d1fj1b2 - Chain 'C':
Compound: hybridoma antibody la2 (light chain)
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d1fj1c1, d1fj1c2 - Chain 'D':
Compound: hybridoma antibody la2 (heavy chain)
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d1fj1d1, d1fj1d2 - Chain 'E':
Compound: Outer surface protein A
Species: Borrelia burgdorferi [TaxId:224326]
Database cross-references and differences (RAF-indexed):
- Uniprot P14013 (Start-256)
- variant (22)
- engineered (67)
- variant (132)
- variant (147)
Domains in SCOPe 2.04: d1fj1e_ - Chain 'F':
Compound: Outer surface protein A
Species: Borrelia burgdorferi [TaxId:224326]
Database cross-references and differences (RAF-indexed):
- Uniprot P14013 (Start-256)
- variant (22)
- engineered (67)
- variant (132)
- variant (147)
Domains in SCOPe 2.04: d1fj1f_ - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>1fj1A (A:)
diqmtqspsslsatlggkvtitckasqdinkyiawyqhkpgkgprllihytstlqpgnps
rfsgsgsgrdysfsisnleaediaiyyclqydnlqrtfgggtkveikradaaptvsifpp
sseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstlt
ltkdeyerhnsytceathktstspivksfnrne
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>1fj1B (B:)
qiqlvqsgpelkkpgetvkisckasgytftdysmywvkqapgkglkrmgwintetgepty
addfkgrfalsldtsastaylhisnlknedtatyfcargldswgqgtsvtvssakttpps
vyplapgcgdttgssvtlgclvkgyfpesvtvtwnsgslsssvhtfpallqsglytmsss
vtvpsstwpsqtvtcsvahpassttvdkkleps
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>1fj1C (C:)
diqmtqspsslsatlggkvtitckasqdinkyiawyqhkpgkgprllihytstlqpgnps
rfsgsgsgrdysfsisnleaediaiyyclqydnlqrtfgggtkveikradaaptvsifpp
sseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstlt
ltkdeyerhnsytceathktstspivksfnrne
- Chain 'D':
Sequence; same for both SEQRES and ATOM records: (download)
>1fj1D (D:)
qiqlvqsgpelkkpgetvkisckasgytftdysmywvkqapgkglkrmgwintetgepty
addfkgrfalsldtsastaylhisnlknedtatyfcargldswgqgtsvtvssakttpps
vyplapgcgdttgssvtlgclvkgyfpesvtvtwnsgslsssvhtfpallqsglytmsss
vtvpsstwpsqtvtcsvahpassttvdkkleps
- Chain 'E':
Sequence, based on SEQRES records: (download)
>1fj1E (E:)
akqnvssldeknsvsvdlpgemkvlvskeknkdgkydliatvdklelkgtsdknngsgvl
egvkadkckvkltisddlgqttlevfkedgktlvskkvtskdkssteekfnekgevseki
itradgtrleytgiksdgsgkakevlkgyvlegtltaekttlvvkegtvtlsknisksge
vsvelndtdssaatkktaawnsgtstltitvnskktkdlvftkentitvqqydsngtkle
gsaveitkldeiknalk
Sequence, based on observed residues (ATOM records): (download)
>1fj1E (E:)
sldeknsvsvdlpgemkvlvskeknkdgkydliatvdklelkgtsdknngsgvlegvkad
kckvkltisddlgqttlevfkedgktlvskkvtskdkssteekfnekgevsekiitradg
trleytgiksdgsgkakevlkgyvlegtltaekttlvvkegtvtlsknisksgevsveln
dtdssaatkktaawnsgtstltitvnskktkdlvftkentitvqqydsngtklegsavei
tkldeiknalk
- Chain 'F':
Sequence, based on SEQRES records: (download)
>1fj1F (F:)
akqnvssldeknsvsvdlpgemkvlvskeknkdgkydliatvdklelkgtsdknngsgvl
egvkadkckvkltisddlgqttlevfkedgktlvskkvtskdkssteekfnekgevseki
itradgtrleytgiksdgsgkakevlkgyvlegtltaekttlvvkegtvtlsknisksge
vsvelndtdssaatkktaawnsgtstltitvnskktkdlvftkentitvqqydsngtkle
gsaveitkldeiknalk
Sequence, based on observed residues (ATOM records): (download)
>1fj1F (F:)
sldeknsvsvdlpgemkvlvskeknkdgkydliatvdklelkgtsdknngsgvlegvkad
kckvkltisddlgqttlevfkedgktlvskkvtskdkssteekfnekgevsekiitradg
trleytgiksdgsgkakevlkgyvlegtltaekttlvvkegtvtlsknisksgevsveln
dtdssaatkktaawnsgtstltitvnskktkdlvftkentitvqqydsngtklegsavei
tkldeiknalk