PDB entry 1f5q

View 1f5q on RCSB PDB site
Description: crystal structure of murine gamma herpesvirus cyclin complexed to human cyclin dependent kinase 2
Class: transferase
Keywords: herpesviral cyclin, cyclin dependent kinase. protein/protein complex, TRANSFERASE
Deposited on 2000-06-15, released 2000-12-27
The last revision prior to the SCOPe 2.07 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.234
AEROSPACI score: 0.28 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: cyclin dependent kinase 2
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1f5qa_
  • Chain 'B':
    Compound: gamma herpesvirus cyclin
    Species: Murid herpesvirus 4 [TaxId:33708]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1f5qb1, d1f5qb2
  • Chain 'C':
    Compound: cyclin dependent kinase 2
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1f5qc_
  • Chain 'D':
    Compound: gamma herpesvirus cyclin
    Species: Murid herpesvirus 4 [TaxId:33708]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1f5qd1, d1f5qd2
  • Heterogens: CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >1f5qA (A:)
    menfqkvekigegtygvvykarnkltgevvalkkirldtetegvpstaireisllkelnh
    pnivklldvihtenklylvfeflhqdlkkfmdasaltgiplpliksylfqllqglafchs
    hrvlhrdlkpqnllintegaikladfglarafgvpvrtythevvtlwyrapeillgckyy
    stavdiwslgcifaemvtrralfpgdseidqlfrifrtlgtpdevvwpgvtsmpdykpsf
    pkwarqdfskvvppldedgrsllsqmlhydpnkrisakaalahpffqdvtkpvphlrl
    

    Sequence, based on observed residues (ATOM records): (download)
    >1f5qA (A:)
    menfqkvekegtygvvykarnkltgevvalkkirldtetegvpstaireisllkelnhpn
    ivklldvihtenklylvfeflhqdlkkfmdasaltgiplpliksylfqllqglafchshr
    vlhrdlkpqnllintegaikladfglarafgvpvrtythevvtlwyrapeillgckyyst
    avdiwslgcifaemvtrralfpgdseidqlfrifrtlgtpdevvwpgvtsmpdykpsfpk
    warqdfskvvppldedgrsllsqmlhydpnkrisakaalahpffqdvtkpvphlrl
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >1f5qB (B:)
    masqefqgfldssllneedcrqmiyrserehdarmvgvnvdqhftsqyrkvlttwmfcvc
    kdlrqdnnvfplavalldelflstridrenyqstaavalhiagkvraympikatqlaylc
    ggattadklltlevksldtlswvadrclstdlicyilhimhapredylniynlcrpkifc
    alcdgrsamkrpvlitlacmhltmnqkydyyenridgvckslyitkeelhqccdlvdiai
    vsfdenyfkina
    

    Sequence, based on observed residues (ATOM records): (download)
    >1f5qB (B:)
    fqgfldssllneedcrqmiyrserehdarmvgvnvdqhftsqyrkvlttwmfcvckdlrq
    dnnvfplavalldelflstridrenyqstaavalhiagkvraympikatqlaylcggatt
    adklltlevksldtlswvadrclstdlicyilhimhapredylniynlcrpkifcalcdg
    rsamkrpvlitlacmhltmnqkydyyenridgvckslyitkeelhqccdlvdiaivsfde
    nyfkina
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >1f5qC (C:)
    menfqkvekigegtygvvykarnkltgevvalkkirldtetegvpstaireisllkelnh
    pnivklldvihtenklylvfeflhqdlkkfmdasaltgiplpliksylfqllqglafchs
    hrvlhrdlkpqnllintegaikladfglarafgvpvrtythevvtlwyrapeillgckyy
    stavdiwslgcifaemvtrralfpgdseidqlfrifrtlgtpdevvwpgvtsmpdykpsf
    pkwarqdfskvvppldedgrsllsqmlhydpnkrisakaalahpffqdvtkpvphlrl
    

    Sequence, based on observed residues (ATOM records): (download)
    >1f5qC (C:)
    menfqkvekegtygvvykarngevvalkkirldtetegvpstaireisllkelnhpnivk
    lldvihtenklylvfeflhqdlkkfmdasaltgiplpliksylfqllqglafchshrvlh
    rdlkpqnllintegaikladfglarafgvpvrtythevvtlwyrapeillgckyystavd
    iwslgcifaemvtrralfpgdseidqlfrifrtlgtpdevvwpgvtsmpdykpsfpkwar
    qdfppldedgrsllsqmlhydpnkrisakaalahpffqdvtkpvphlr
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >1f5qD (D:)
    masqefqgfldssllneedcrqmiyrserehdarmvgvnvdqhftsqyrkvlttwmfcvc
    kdlrqdnnvfplavalldelflstridrenyqstaavalhiagkvraympikatqlaylc
    ggattadklltlevksldtlswvadrclstdlicyilhimhapredylniynlcrpkifc
    alcdgrsamkrpvlitlacmhltmnqkydyyenridgvckslyitkeelhqccdlvdiai
    vsfdenyfkina
    

    Sequence, based on observed residues (ATOM records): (download)
    >1f5qD (D:)
    efqgfldssllneedcrqmiyrserehdarmvgvnvdqhftsqyrkvlttwmfcvckdlr
    qdnnvfplavalldelflstridrenyqstaavalhiagkvraympikatqlaylcggat
    tadklltlevksldtlswvadrclstdlicyilhimhapredylniynlcrpkifcalcd
    grsamkrpvlitlacmhltmnqkydyyenridgvckslyitkeelhqccdlvdiaivsfd
    enyfkina