PDB entry 1ep5

View 1ep5 on RCSB PDB site
Description: crystal structure of the conserved core domain of venezualan equine encephalitis capsid protein
Class: hydrolase
Keywords: beta barrel, hydrolase
Deposited on 2000-03-27, released 2003-07-08
The last revision prior to the SCOPe 2.05 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.228
AEROSPACI score: 0.35 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: capsid protein c
    Species: Venezuelan equine encephalitis virus [TaxId:11036]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d1ep5a_
  • Chain 'B':
    Compound: capsid protein c
    Species: Venezuelan equine encephalitis virus [TaxId:11036]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d1ep5b_
  • Chain 'C':
    Compound: capsid protein c
    Species: Venezuelan equine encephalitis virus [TaxId:11036]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d1ep5c_
  • Heterogens: SO4, URE, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1ep5A (A:)
vmklesdktfpimlegkingyacvvggklfrpmhvegkidndvlaalktkkaskydleya
dvpqnmradtfkythekpqgyyswhhgavqyengrftvpkgvgakgdsgrpildnqgrvv
aivlggvnegsrtalsvvmwnekgvtvkytpenceqw

    Sequence, based on observed residues (ATOM records): (download) 
    >1ep5A (A:)
mklesdktfpimlegkingyacvvggklfrpmhvegkidndvlaalktkkaskydleyad
vpqnmradtfkythekpqgyyswhhgavqyengrftvpkgvgakgdsgrpildnqgrvva
ivlggvnegsrtalsvvmwnekgvtvkytpenceqw

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1ep5B (B:)
vmklesdktfpimlegkingyacvvggklfrpmhvegkidndvlaalktkkaskydleya
dvpqnmradtfkythekpqgyyswhhgavqyengrftvpkgvgakgdsgrpildnqgrvv
aivlggvnegsrtalsvvmwnekgvtvkytpenceqw

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1ep5C (C:)
vmklesdktfpimlegkingyacvvggklfrpmhvegkidndvlaalktkkaskydleya
dvpqnmradtfkythekpqgyyswhhgavqyengrftvpkgvgakgdsgrpildnqgrvv
aivlggvnegsrtalsvvmwnekgvtvkytpenceqw

    Sequence, based on observed residues (ATOM records): (download) 
    >1ep5C (C:)
sdktfpimlegkingyacvvggklfrpmhvegkidndvlaalktkkaskydleyadvpqn
mradtfkythekpqgyyswhhgavqyengrftvpkgvgakgdsgrpildnqgrvvaivlg
gvnegsrtalsvvmwnekgvtvkytpenceqw