PDB entry 1eg0

View 1eg0 on RCSB PDB site
Description: fitting of components with known structure into an 11.5 a cryo-em map of the e.coli 70s ribosome
Deposited on 2000-02-11, released 2000-03-06
The last revision was dated 2009-02-24, with a file datestamp of 2009-02-07.
Experiment type: EM
Resolution: N/A
R-factor: N/A
AEROSPACI score: -0.25 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: protein (s4 ribosomal protein)
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P81288 (0-158)
      • expression tag (0)
  • Chain 'B':
    Compound: protein (s5 ribosomal protein)
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: protein (s6 ribosomal protein)
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: protein (s7 ribosomal protein)
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: protein (s8 ribosomal protein)
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • PIR A53870 (Start-137)
  • Chain 'F':
    Compound: protein (s15 ribosomal protein)
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: protein (s17 ribosomal protein)
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: protein (s20 ribosomal protein)
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • PDB 1EG0 (0-99)
  • Chain 'I':
    Compound: fragment of 16s rRNA helix 23
    Species: Escherichia coli [TaxId:562]
  • Chain 'J':
    Compound: protein (ribosomal protein l6)
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
  • Chain 'K':
    Compound: protein (ribosomal protein l11)
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
  • Chain 'L':
    Compound: fragment of 23s rRNA
    Species: Escherichia coli [TaxId:562]
  • Chain 'M':
    Compound: helix 95 of 23s rRNA
    Species: Escherichia coli [TaxId:562]
  • Chain 'N':
    Compound: protein (ribosomal protein l1)
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
  • Chain 'O':
    Compound: formyl-methionyl-tRNA
    Species: Escherichia coli [TaxId:562]

PDB Chain Sequences:
This PDB entry is not classified in SCOP 1.55, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records:
    >1eg0A (A:)
mklseyglqlqekqklrhmygvnerqfrktfeeagkmpgkhgenfmillesrldnlvyrl
glartrrqarqlvthghilvdgsrvnipsyrvkpgqtiavreksrnlqvikealeannyi
pdylsfdpekmegtytrlperselpaeinealivefysr

  • Chain 'B':
    Sequence, based on SEQRES records:
    >1eg0B (B:)
mrrinpnkleleervvavnrvakvvkggrrlrfsalvvvgdknghvgfgtgkaqevpeai
rkaiedakknlievpivgttiphevighfgageiilkpasegtgviaggparavlelagi
sdilsksigsntpinmvratfdglkqlk

    Sequence, based on observed residues (ATOM records):
    >1eg0B (B:)
inpnkleleervvavnrvakvvkggrrlrfsalvvvgdknghvgfgtgkaqevpeairka
iedakknlievpivgttiphevighfgageiilkpasegtgviaggparavlelagisdi
lsksigsntpinmvratfdglkqlk

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records:
    >1eg0C (C:)
mrryevnivlnpnldqsqlalekeiiqralenygarvekveelglrrlaypiakdpqgyf
lwyqvempedrvndlarelrirdnvrrvmvvksqepf

  • Chain 'D':
    Sequence, based on SEQRES records:
    >1eg0D (D:)
marrrraevrqlqpdlvygdvlvtafinkimrdgkknlaarifydackiiqektgqeplk
vfkqavenvkprmevrsrrvgganyqvpmevsprrqqslalrwlvqaanqrperraavri
ahelmdaaegkggavkkkedvermae

    Sequence, based on observed residues (ATOM records):
    >1eg0D (D:)
lqpdlvygdvlvtafinkimrdgkknlaarifydackiiqektgqeplkvfkqavenvkp
rmevrsrrvgganyqvpmevsprrqqslalrwlvqaanqrperraavriahelmdaaegk
ggavkkkedvermae

  • Chain 'E':
    Sequence, based on SEQRES records:
    >1eg0E (E:)
mltdpiadmltrirnatrvykestdvpasrfkeeilrilaregfikgyervdvdgkpylr
vylkygprrqgpdprpeqvihhirriskpgrrvyvgvkeiprvrrglgiailstskgvlt
drearklgvggelicevw

    Sequence, based on observed residues (ATOM records):
    >1eg0E (E:)
tdpiadmltrirnatrvykestdvpasrfkeeilrilaregfikgyervdvdgkpylrvy
lkygprrqgpdprpeqvihhirriskpgrrvyvgvkeiprvrrglgiailstskgvltdr
earklgvggelicevw

  • Chain 'F':
    Sequence, based on SEQRES records:
    >1eg0F (F:)
mpitkeekqkviqefarfpgdtgstevqvalltlrinrlsehlkvhkkdhhshrgllmmv
gqrrrllrylqredperyralieklgirg

    Sequence, based on observed residues (ATOM records):
    >1eg0F (F:)
pitkeekqkviqefarfpgdtgstevqvalltlrinrlsehlkvhkkdhhshrgllmmvg
qrrrllrylqredperyralieklgirg

  • Chain 'G':
    Sequence, based on SEQRES records:
    >1eg0G (G:)
sernqrkvyvgrvvsdkmdktitvlvetykkhplygkrvkyskkykahdehneakvgdiv
kimetrplsatkrfrlveivekavragagagaa

    Sequence, based on observed residues (ATOM records):
    >1eg0G (G:)
qrkvyvgrvvsdkmdktitvlvetykkhplygkrvkyskkykahdehneakvgdivkime
trplsatkrfrlveivekavragagagaa

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records:
    >1eg0H (H:)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx

  • Chain 'I':
    No sequence available.

  • Chain 'J':
    Sequence, based on SEQRES records:
    >1eg0J (J:)
msrvgkkpieipagvtvtvngntvtvkgpkgeltrtfhpdmtitvegnvitvtrpsdekh
hralhgttrsllanmvegvskgyekalelvgvgyraskqgkklvlsvgyshpveiepeeg
leievpsqtkiivkgadkqrvgelaaniravrppepykgkgiryegelvrl

    Sequence, based on observed residues (ATOM records):
    >1eg0J (J:)
pieipagvtvtvngntvtvkgpkgeltrtfhpdmtitvegnvitvtrpsdekhhralhgt
trsllanmvegvskgyekalelvgvgyraskqgkklvlsvgyshpveiepeegleievps
qtkiivkgadkqrvgelaaniravrppepykgkgiryegelvrl

  • Chain 'K':
    Sequence, based on SEQRES records:
    >1eg0K (K:)
makkvaaqiklqlpagkatpappvgpalgqhgvnimefckrfnaetadkagmilpvvitv
yedksftfiiktppasfllkkaagiekgssepkrkivgkvtrkqieeiaktkmpdlnans
leaamkiiegtaksmgievv

    Sequence, based on observed residues (ATOM records):
    >1eg0K (K:)
qiklqlpagkatpappvgpalgqhgvnimefckrfnaetadkagmilpvvitvyedksft
fiiktppasfllkkaagiekgssepkrkivgkvtrkqieeiaktkmpdlnansleaamki
iegtaksmgievv

  • Chain 'L':
    No sequence available.

  • Chain 'M':
    No sequence available.

  • Chain 'N':
    Sequence, based on SEQRES records:
    >1eg0N (N:)
mpkhgkryrallekvdpnkiytideaahlvkelatakfdetvevhaklgidprrsdqnvr
gtvslphglgkqvrvlaiakgekikeaeeagadyvggeeiiqkildgwmdfdavvatpdv
mgavgsklgrilgprgllpnpkagtvgfnigeiireikagriefrndktgaihapvgkas
fppekladnirafiraleahkpegakgtflrsvyvtttmgpsvrinphs

    Sequence, based on observed residues (ATOM records):
    >1eg0N (N:)
allekvdpnkiytideaahlvkelatakfdetvevhaklgidprrsdqnvrgtvslphgl
gkqvrvlaiakgekikeaeeagadyvggeeiiqkildgwmdfdavvatpdvmgavgsklg
rilgprgllpnpkagtvgfnigeiireikagriefrndktgaihapvgkasfppekladn
irafiraleahkpegakgtflrsvyvtttmgpsvrinphs

  • Chain 'O':
    No sequence available.