PDB entry 1e6j
View 1e6j on RCSB PDB site
Description: Crystal structure of HIV-1 capsid protein (p24) in complex with Fab13B5
Class: viral protein
Keywords: hiv capsid protein (p24), p24, fab, hiv-1, virus assembly, capsid, ca, antigen, antibody, protein-protein interactions, viral protein
Deposited on
2000-08-18, released
2000-11-27
The last revision prior to the SCOPe 2.04 freeze date was dated
2014-03-12, with a file datestamp of
2014-03-07.
Experiment type: XRAY
Resolution: 3 Å
R-factor: 0.21
AEROSPACI score: 0.18
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'H':
Compound: immunoglobulin
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d1e6jh1, d1e6jh2 - Chain 'L':
Compound: immunoglobulin
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d1e6jl1, d1e6jl2 - Chain 'P':
Compound: capsid protein p24
Species: HIV-1 M:B_HXB2R [TaxId:11706]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d1e6jp1, d1e6jp2
PDB Chain Sequences:
- Chain 'H':
Sequence; same for both SEQRES and ATOM records: (download)
>1e6jH (H:)
evqlqqsgaelarpgasvkmsckasgytftsytmhwvkqrpgqglewigyinpssgysny
nqkfkdkatltadkssstaymqlssltsedsavyycsrpvvrlgynfdywgqgstltvss
akttppsvyplapgsaaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsd
lytlsssvtvpsstwpsetvtcnvahpasstkvdkkivp
- Chain 'L':
Sequence; same for both SEQRES and ATOM records: (download)
>1e6jL (L:)
eivltqspaitaaslgqkvtitcsasssvsymhwyqqksgtspkpwiyeisklasgvpar
fsgsgsgtsysltissmeaedaaiyycqqwnypftfgsgtkleikradaaptvsifppss
eqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstltlt
kdeyerhnsytceathktstspivksfnrn
- Chain 'P':
Sequence; same for both SEQRES and ATOM records: (download)
>1e6jP (P:)
vhqaisprtlnawvkvveekafspevipmfsalsegatpqdlntmlntvgghqaamqmlk
etineeaaewdrvhpvhagpiapgqmreprgsdiagttstlqeqigwmtnnppipvgeiy
krwiilglnkivrmysptsildirqgpkepfrdyvdrfyktlraeqasqevknwmtetll
vqnanpdcktilkalgpaatleemmtacqg