PDB entry 1dz5

View 1dz5 on RCSB PDB site
Description: The NMR structure of the 38KDa U1A protein-PIE RNA complex reveals the basis of cooperativity in regulation of polyadenylation by human U1A protein
Class: ribonucleoprotein/RNA
Keywords: ribonucleoprotein-RNA complex, polyadenylation, protein protein interaction, RNA protein interaction
Deposited on 2000-02-16, released 2000-03-29
The last revision prior to the SCOPe 2.05 freeze date was dated 2013-05-15, with a file datestamp of 2013-05-10.
Experiment type: NMR
Resolution: N/A
R-factor: N/A
AEROSPACI score: 0.02 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: U1 small nuclear ribonucleoprotein A
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P09012 (0-100)
      • engineered mutation (29)
      • engineered mutation (34)
    Domains in SCOPe 2.05: d1dz5a_
  • Chain 'B':
    Compound: U1 small nuclear ribonucleoprotein A
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P09012 (0-100)
      • engineered mutation (29)
      • engineered mutation (34)
    Domains in SCOPe 2.05: d1dz5b_
  • Chain 'C':
    Compound: pie, RNA (5'-r(*gp*ap*gp*ap*cp*ap*up*up*gp*cp*ap*cp*cp* cp*gp*gp*ap*gp*up*cp*up*c)-3')
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
  • Chain 'D':
    Compound: pie, RNA (5'-r(*gp*ap*gp*ap*cp*ap*up*up*gp*cp*ap*cp*cp* cp*gp*gp*ap*gp*up*cp*up*c)-3')
    Species: HOMO SAPIENS, synthetic [TaxId:9606]

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1dz5A (A:)
    avpetrpnhtiyinnlnekikkdelkkslhaifsrfgqildilvsrslkmrgqafvifke
    vssatnalrsmqgfpfydkpmriqyaktdsdiiakmkgtfv
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1dz5B (B:)
    avpetrpnhtiyinnlnekikkdelkkslhaifsrfgqildilvsrslkmrgqafvifke
    vssatnalrsmqgfpfydkpmriqyaktdsdiiakmkgtfv
    

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.