SCOP 1.59: Structural Classification of Proteins

PDB entry 1der

View 1der on RCSB PDB site
Description: the 2.4 angstrom crystal structure of the bacterial chaperonin groel complexed with atp-gamma-s
Deposited on 1996-01-12, released 1996-11-15
The last revision prior to the SCOP 1.59 freeze date was dated 1996-11-15, with a file datestamp of 1996-11-15.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.247
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Domains in SCOP 1.59: d1dera1, d1dera2, d1dera3
Chain 'B':
Domains in SCOP 1.59: d1derb1, d1derb2, d1derb3
Chain 'C':
Domains in SCOP 1.59: d1derc1, d1derc2, d1derc3
Chain 'D':
Domains in SCOP 1.59: d1derd1, d1derd2, d1derd3
Chain 'E':
Domains in SCOP 1.59: d1dere1, d1dere2, d1dere3
Chain 'F':
Domains in SCOP 1.59: d1derf1, d1derf2, d1derf3
Chain 'G':
Domains in SCOP 1.59: d1derg1, d1derg2, d1derg3
Chain 'H':
Domains in SCOP 1.59: d1derh1, d1derh2, d1derh3
Chain 'I':
Domains in SCOP 1.59: d1deri1, d1deri2, d1deri3
Chain 'J':
Domains in SCOP 1.59: d1derj1, d1derj2, d1derj3
Chain 'K':
Domains in SCOP 1.59: d1derk1, d1derk2, d1derk3
Chain 'L':
Domains in SCOP 1.59: d1derl1, d1derl2, d1derl3
Chain 'M':
Domains in SCOP 1.59: d1derm1, d1derm2, d1derm3
Chain 'N':
Domains in SCOP 1.59: d1dern1, d1dern2, d1dern3

PDB Chain Sequences:

Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)

>1derA (A:)
aakdvkfgndagvkmlrgvnvladavkvtlgpkgrnvvldksfgaptitkdgvsvareie
ledkfenmgaqmvkevaskandaagdgtttatvlaqaiiteglkavaagmnpmdlkrgid
kavtvaveelkalsvpcsdskaiaqvgtisansdetvgkliaeamdkvgkegvitvedgt
glqdeldvvegmqfdrgylspyfinkpetgavelespfilladkkisniremlpvleava
kagkplliiaedvegealatlvvntmrgivkvaavkapgfgdrrkamlqdiatltggtvi
seeigmelekatledlgqakrvvinkdtttiidgvgeeaaiqgrvaqirqqieeatsdyd
reklqervaklaggvavikvgaatevemkekkarvedalhatraaveegvvagggvalir
vaskladlrgqnedqnvgikvalrameaplrqivlncgeepsvvantvkggdgnygynaa
teeygnmidmgildptkvtrsalqyaasvaglmittecmvtdlpk

Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)

>1derB (B:)
aakdvkfgndagvkmlrgvnvladavkvtlgpkgrnvvldksfgaptitkdgvsvareie
ledkfenmgaqmvkevaskandaagdgtttatvlaqaiiteglkavaagmnpmdlkrgid
kavtvaveelkalsvpcsdskaiaqvgtisansdetvgkliaeamdkvgkegvitvedgt
glqdeldvvegmqfdrgylspyfinkpetgavelespfilladkkisniremlpvleava
kagkplliiaedvegealatlvvntmrgivkvaavkapgfgdrrkamlqdiatltggtvi
seeigmelekatledlgqakrvvinkdtttiidgvgeeaaiqgrvaqirqqieeatsdyd
reklqervaklaggvavikvgaatevemkekkarvedalhatraaveegvvagggvalir
vaskladlrgqnedqnvgikvalrameaplrqivlncgeepsvvantvkggdgnygynaa
teeygnmidmgildptkvtrsalqyaasvaglmittecmvtdlpk

Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)

>1derC (C:)
aakdvkfgndagvkmlrgvnvladavkvtlgpkgrnvvldksfgaptitkdgvsvareie
ledkfenmgaqmvkevaskandaagdgtttatvlaqaiiteglkavaagmnpmdlkrgid
kavtvaveelkalsvpcsdskaiaqvgtisansdetvgkliaeamdkvgkegvitvedgt
glqdeldvvegmqfdrgylspyfinkpetgavelespfilladkkisniremlpvleava
kagkplliiaedvegealatlvvntmrgivkvaavkapgfgdrrkamlqdiatltggtvi
seeigmelekatledlgqakrvvinkdtttiidgvgeeaaiqgrvaqirqqieeatsdyd
reklqervaklaggvavikvgaatevemkekkarvedalhatraaveegvvagggvalir
vaskladlrgqnedqnvgikvalrameaplrqivlncgeepsvvantvkggdgnygynaa
teeygnmidmgildptkvtrsalqyaasvaglmittecmvtdlpk

Chain 'D':
Sequence; same for both SEQRES and ATOM records: (download)

>1derD (D:)
aakdvkfgndagvkmlrgvnvladavkvtlgpkgrnvvldksfgaptitkdgvsvareie
ledkfenmgaqmvkevaskandaagdgtttatvlaqaiiteglkavaagmnpmdlkrgid
kavtvaveelkalsvpcsdskaiaqvgtisansdetvgkliaeamdkvgkegvitvedgt
glqdeldvvegmqfdrgylspyfinkpetgavelespfilladkkisniremlpvleava
kagkplliiaedvegealatlvvntmrgivkvaavkapgfgdrrkamlqdiatltggtvi
seeigmelekatledlgqakrvvinkdtttiidgvgeeaaiqgrvaqirqqieeatsdyd
reklqervaklaggvavikvgaatevemkekkarvedalhatraaveegvvagggvalir
vaskladlrgqnedqnvgikvalrameaplrqivlncgeepsvvantvkggdgnygynaa
teeygnmidmgildptkvtrsalqyaasvaglmittecmvtdlpk

Chain 'E':
Sequence; same for both SEQRES and ATOM records: (download)

>1derE (E:)
aakdvkfgndagvkmlrgvnvladavkvtlgpkgrnvvldksfgaptitkdgvsvareie
ledkfenmgaqmvkevaskandaagdgtttatvlaqaiiteglkavaagmnpmdlkrgid
kavtvaveelkalsvpcsdskaiaqvgtisansdetvgkliaeamdkvgkegvitvedgt
glqdeldvvegmqfdrgylspyfinkpetgavelespfilladkkisniremlpvleava
kagkplliiaedvegealatlvvntmrgivkvaavkapgfgdrrkamlqdiatltggtvi
seeigmelekatledlgqakrvvinkdtttiidgvgeeaaiqgrvaqirqqieeatsdyd
reklqervaklaggvavikvgaatevemkekkarvedalhatraaveegvvagggvalir
vaskladlrgqnedqnvgikvalrameaplrqivlncgeepsvvantvkggdgnygynaa
teeygnmidmgildptkvtrsalqyaasvaglmittecmvtdlpk

Chain 'F':
Sequence; same for both SEQRES and ATOM records: (download)

>1derF (F:)
aakdvkfgndagvkmlrgvnvladavkvtlgpkgrnvvldksfgaptitkdgvsvareie
ledkfenmgaqmvkevaskandaagdgtttatvlaqaiiteglkavaagmnpmdlkrgid
kavtvaveelkalsvpcsdskaiaqvgtisansdetvgkliaeamdkvgkegvitvedgt
glqdeldvvegmqfdrgylspyfinkpetgavelespfilladkkisniremlpvleava
kagkplliiaedvegealatlvvntmrgivkvaavkapgfgdrrkamlqdiatltggtvi
seeigmelekatledlgqakrvvinkdtttiidgvgeeaaiqgrvaqirqqieeatsdyd
reklqervaklaggvavikvgaatevemkekkarvedalhatraaveegvvagggvalir
vaskladlrgqnedqnvgikvalrameaplrqivlncgeepsvvantvkggdgnygynaa
teeygnmidmgildptkvtrsalqyaasvaglmittecmvtdlpk

Chain 'G':
Sequence; same for both SEQRES and ATOM records: (download)

>1derG (G:)
aakdvkfgndagvkmlrgvnvladavkvtlgpkgrnvvldksfgaptitkdgvsvareie
ledkfenmgaqmvkevaskandaagdgtttatvlaqaiiteglkavaagmnpmdlkrgid
kavtvaveelkalsvpcsdskaiaqvgtisansdetvgkliaeamdkvgkegvitvedgt
glqdeldvvegmqfdrgylspyfinkpetgavelespfilladkkisniremlpvleava
kagkplliiaedvegealatlvvntmrgivkvaavkapgfgdrrkamlqdiatltggtvi
seeigmelekatledlgqakrvvinkdtttiidgvgeeaaiqgrvaqirqqieeatsdyd
reklqervaklaggvavikvgaatevemkekkarvedalhatraaveegvvagggvalir
vaskladlrgqnedqnvgikvalrameaplrqivlncgeepsvvantvkggdgnygynaa
teeygnmidmgildptkvtrsalqyaasvaglmittecmvtdlpk

Chain 'H':
Sequence; same for both SEQRES and ATOM records: (download)

>1derH (H:)
aakdvkfgndagvkmlrgvnvladavkvtlgpkgrnvvldksfgaptitkdgvsvareie
ledkfenmgaqmvkevaskandaagdgtttatvlaqaiiteglkavaagmnpmdlkrgid
kavtvaveelkalsvpcsdskaiaqvgtisansdetvgkliaeamdkvgkegvitvedgt
glqdeldvvegmqfdrgylspyfinkpetgavelespfilladkkisniremlpvleava
kagkplliiaedvegealatlvvntmrgivkvaavkapgfgdrrkamlqdiatltggtvi
seeigmelekatledlgqakrvvinkdtttiidgvgeeaaiqgrvaqirqqieeatsdyd
reklqervaklaggvavikvgaatevemkekkarvedalhatraaveegvvagggvalir
vaskladlrgqnedqnvgikvalrameaplrqivlncgeepsvvantvkggdgnygynaa
teeygnmidmgildptkvtrsalqyaasvaglmittecmvtdlpk

Chain 'I':
Sequence; same for both SEQRES and ATOM records: (download)

>1derI (I:)
aakdvkfgndagvkmlrgvnvladavkvtlgpkgrnvvldksfgaptitkdgvsvareie
ledkfenmgaqmvkevaskandaagdgtttatvlaqaiiteglkavaagmnpmdlkrgid
kavtvaveelkalsvpcsdskaiaqvgtisansdetvgkliaeamdkvgkegvitvedgt
glqdeldvvegmqfdrgylspyfinkpetgavelespfilladkkisniremlpvleava
kagkplliiaedvegealatlvvntmrgivkvaavkapgfgdrrkamlqdiatltggtvi
seeigmelekatledlgqakrvvinkdtttiidgvgeeaaiqgrvaqirqqieeatsdyd
reklqervaklaggvavikvgaatevemkekkarvedalhatraaveegvvagggvalir
vaskladlrgqnedqnvgikvalrameaplrqivlncgeepsvvantvkggdgnygynaa
teeygnmidmgildptkvtrsalqyaasvaglmittecmvtdlpk

Chain 'J':
Sequence; same for both SEQRES and ATOM records: (download)

>1derJ (J:)
aakdvkfgndagvkmlrgvnvladavkvtlgpkgrnvvldksfgaptitkdgvsvareie
ledkfenmgaqmvkevaskandaagdgtttatvlaqaiiteglkavaagmnpmdlkrgid
kavtvaveelkalsvpcsdskaiaqvgtisansdetvgkliaeamdkvgkegvitvedgt
glqdeldvvegmqfdrgylspyfinkpetgavelespfilladkkisniremlpvleava
kagkplliiaedvegealatlvvntmrgivkvaavkapgfgdrrkamlqdiatltggtvi
seeigmelekatledlgqakrvvinkdtttiidgvgeeaaiqgrvaqirqqieeatsdyd
reklqervaklaggvavikvgaatevemkekkarvedalhatraaveegvvagggvalir
vaskladlrgqnedqnvgikvalrameaplrqivlncgeepsvvantvkggdgnygynaa
teeygnmidmgildptkvtrsalqyaasvaglmittecmvtdlpk

Chain 'K':
Sequence; same for both SEQRES and ATOM records: (download)

>1derK (K:)
aakdvkfgndagvkmlrgvnvladavkvtlgpkgrnvvldksfgaptitkdgvsvareie
ledkfenmgaqmvkevaskandaagdgtttatvlaqaiiteglkavaagmnpmdlkrgid
kavtvaveelkalsvpcsdskaiaqvgtisansdetvgkliaeamdkvgkegvitvedgt
glqdeldvvegmqfdrgylspyfinkpetgavelespfilladkkisniremlpvleava
kagkplliiaedvegealatlvvntmrgivkvaavkapgfgdrrkamlqdiatltggtvi
seeigmelekatledlgqakrvvinkdtttiidgvgeeaaiqgrvaqirqqieeatsdyd
reklqervaklaggvavikvgaatevemkekkarvedalhatraaveegvvagggvalir
vaskladlrgqnedqnvgikvalrameaplrqivlncgeepsvvantvkggdgnygynaa
teeygnmidmgildptkvtrsalqyaasvaglmittecmvtdlpk

Chain 'L':
Sequence; same for both SEQRES and ATOM records: (download)

>1derL (L:)
aakdvkfgndagvkmlrgvnvladavkvtlgpkgrnvvldksfgaptitkdgvsvareie
ledkfenmgaqmvkevaskandaagdgtttatvlaqaiiteglkavaagmnpmdlkrgid
kavtvaveelkalsvpcsdskaiaqvgtisansdetvgkliaeamdkvgkegvitvedgt
glqdeldvvegmqfdrgylspyfinkpetgavelespfilladkkisniremlpvleava
kagkplliiaedvegealatlvvntmrgivkvaavkapgfgdrrkamlqdiatltggtvi
seeigmelekatledlgqakrvvinkdtttiidgvgeeaaiqgrvaqirqqieeatsdyd
reklqervaklaggvavikvgaatevemkekkarvedalhatraaveegvvagggvalir
vaskladlrgqnedqnvgikvalrameaplrqivlncgeepsvvantvkggdgnygynaa
teeygnmidmgildptkvtrsalqyaasvaglmittecmvtdlpk

Chain 'M':
Sequence; same for both SEQRES and ATOM records: (download)

>1derM (M:)
aakdvkfgndagvkmlrgvnvladavkvtlgpkgrnvvldksfgaptitkdgvsvareie
ledkfenmgaqmvkevaskandaagdgtttatvlaqaiiteglkavaagmnpmdlkrgid
kavtvaveelkalsvpcsdskaiaqvgtisansdetvgkliaeamdkvgkegvitvedgt
glqdeldvvegmqfdrgylspyfinkpetgavelespfilladkkisniremlpvleava
kagkplliiaedvegealatlvvntmrgivkvaavkapgfgdrrkamlqdiatltggtvi
seeigmelekatledlgqakrvvinkdtttiidgvgeeaaiqgrvaqirqqieeatsdyd
reklqervaklaggvavikvgaatevemkekkarvedalhatraaveegvvagggvalir
vaskladlrgqnedqnvgikvalrameaplrqivlncgeepsvvantvkggdgnygynaa
teeygnmidmgildptkvtrsalqyaasvaglmittecmvtdlpk

Chain 'N':
Sequence; same for both SEQRES and ATOM records: (download)

>1derN (N:)
aakdvkfgndagvkmlrgvnvladavkvtlgpkgrnvvldksfgaptitkdgvsvareie
ledkfenmgaqmvkevaskandaagdgtttatvlaqaiiteglkavaagmnpmdlkrgid
kavtvaveelkalsvpcsdskaiaqvgtisansdetvgkliaeamdkvgkegvitvedgt
glqdeldvvegmqfdrgylspyfinkpetgavelespfilladkkisniremlpvleava
kagkplliiaedvegealatlvvntmrgivkvaavkapgfgdrrkamlqdiatltggtvi
seeigmelekatledlgqakrvvinkdtttiidgvgeeaaiqgrvaqirqqieeatsdyd
reklqervaklaggvavikvgaatevemkekkarvedalhatraaveegvvagggvalir
vaskladlrgqnedqnvgikvalrameaplrqivlncgeepsvvantvkggdgnygynaa
teeygnmidmgildptkvtrsalqyaasvaglmittecmvtdlpk