PDB entry 1ddj

View 1ddj on RCSB PDB site
Description: crystal structure of human plasminogen catalytic domain
Class: blood clotting
Keywords: plasminogen, catalytic domain, blood clotting
Deposited on 1999-11-10, released 2000-02-18
The last revision prior to the SCOPe 2.03 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.194
AEROSPACI score: 0.4 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: plasminogen
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P00747 (0-246)
      • engineered (196)
    Domains in SCOPe 2.03: d1ddja_
  • Chain 'B':
    Compound: plasminogen
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P00747 (0-246)
      • engineered (196)
    Domains in SCOPe 2.03: d1ddjb_
  • Chain 'C':
    Compound: plasminogen
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P00747 (0-246)
      • engineered (196)
    Domains in SCOPe 2.03: d1ddjc_
  • Chain 'D':
    Compound: plasminogen
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P00747 (0-246)
      • engineered (196)
    Domains in SCOPe 2.03: d1ddjd_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1ddjA (A:)
    sfdcgkpqvepkkcpgrvvggcvahphswpwqvslrtrfgmhfcggtlispewvltaahc
    leksprpssykvilgahqevnlephvqeievsrlfleptrkdiallklsspavitdkvip
    aclpspnyvvadrtecfitgwgetqgtfgagllkeaqlpvienkvcnryeflngrvqste
    lcaghlaggtdscqgdaggplvcfekdkyilqgvtswglgcarpnkpgvyvrvsrfvtwi
    egvmrnn
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1ddjB (B:)
    sfdcgkpqvepkkcpgrvvggcvahphswpwqvslrtrfgmhfcggtlispewvltaahc
    leksprpssykvilgahqevnlephvqeievsrlfleptrkdiallklsspavitdkvip
    aclpspnyvvadrtecfitgwgetqgtfgagllkeaqlpvienkvcnryeflngrvqste
    lcaghlaggtdscqgdaggplvcfekdkyilqgvtswglgcarpnkpgvyvrvsrfvtwi
    egvmrnn
    

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1ddjC (C:)
    sfdcgkpqvepkkcpgrvvggcvahphswpwqvslrtrfgmhfcggtlispewvltaahc
    leksprpssykvilgahqevnlephvqeievsrlfleptrkdiallklsspavitdkvip
    aclpspnyvvadrtecfitgwgetqgtfgagllkeaqlpvienkvcnryeflngrvqste
    lcaghlaggtdscqgdaggplvcfekdkyilqgvtswglgcarpnkpgvyvrvsrfvtwi
    egvmrnn
    

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1ddjD (D:)
    sfdcgkpqvepkkcpgrvvggcvahphswpwqvslrtrfgmhfcggtlispewvltaahc
    leksprpssykvilgahqevnlephvqeievsrlfleptrkdiallklsspavitdkvip
    aclpspnyvvadrtecfitgwgetqgtfgagllkeaqlpvienkvcnryeflngrvqste
    lcaghlaggtdscqgdaggplvcfekdkyilqgvtswglgcarpnkpgvyvrvsrfvtwi
    egvmrnn