PDB entry 1d0g
View 1d0g on RCSB PDB site
Description: crystal structure of death receptor 5 (dr5) bound to apo2l/trail
Class: apoptosis
Keywords: apoptosis, binding and specificity, ligand-receptor complex, tnf receptor family
Deposited on
1999-09-09, released
1999-10-22
The last revision prior to the SCOPe 2.05 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.222
AEROSPACI score: 0.31
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: apoptosis-2 ligand
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d1d0ga_ - Chain 'B':
Compound: apoptosis-2 ligand
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d1d0gb_ - Chain 'D':
Compound: apoptosis-2 ligand
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d1d0gd_ - Chain 'R':
Compound: death receptor-5
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d1d0gr1, d1d0gr2, d1d0gr3 - Chain 'S':
Compound: death receptor-5
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d1d0gs1, d1d0gs2, d1d0gs3 - Chain 'T':
Compound: death receptor-5
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d1d0gt1, d1d0gt2, d1d0gt3 - Heterogens: ZN, CL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1d0gA (A:)
vrergpqrvaahitgtrgrsntlsspnsknekalgrkinswessrsghsflsnlhlrnge
lvihekgfyyiysqtyfrfqeeikentkndkqmvqyiykytsypdpillmksarnscwsk
daeyglysiyqggifelkendrifvsvtnehlidmdheasffgaflvg
Sequence, based on observed residues (ATOM records): (download)
>1d0gA (A:)
pqrvaahitgtrgekalgrkinswessrsghsflsnlhlrngelvihekgfyyiysqtyf
rfqeeikentkndkqmvqyiykytsypdpillmksarnscwskdaeyglysiyqggifel
kendrifvsvtnehlidmdheasffgaflvg
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1d0gB (B:)
vrergpqrvaahitgtrgrsntlsspnsknekalgrkinswessrsghsflsnlhlrnge
lvihekgfyyiysqtyfrfqeeikentkndkqmvqyiykytsypdpillmksarnscwsk
daeyglysiyqggifelkendrifvsvtnehlidmdheasffgaflvg
Sequence, based on observed residues (ATOM records): (download)
>1d0gB (B:)
pqrvaahitgtrgekalgrkinswessrsghsflsnlhlrngelvihekgfyyiysqtyf
rfqeeikentkndkqmvqyiykytsypdpillmksarnscwskdaeyglysiyqggifel
kendrifvsvtnehlidmdheasffgaflvg
- Chain 'D':
Sequence, based on SEQRES records: (download)
>1d0gD (D:)
vrergpqrvaahitgtrgrsntlsspnsknekalgrkinswessrsghsflsnlhlrnge
lvihekgfyyiysqtyfrfqeeikentkndkqmvqyiykytsypdpillmksarnscwsk
daeyglysiyqggifelkendrifvsvtnehlidmdheasffgaflvg
Sequence, based on observed residues (ATOM records): (download)
>1d0gD (D:)
pqrvaahitgtrgekalgrkinswessrsghsflsnlhlrngelvihekgfyyiysqtyf
rfqeeikentkndkqmvqyiykytsypdpillmksarnscwskdaeyglysiyqggifel
kendrifvsvtnehlidmdheasffgaflvg
- Chain 'R':
Sequence, based on SEQRES records: (download)
>1d0gR (R:)
alitqqdlapqqraapqqkrsspseglcppghhisedgrdcisckygqdysthwndllfc
lrctrcdsgevelspctttrntvcqceegtfreedspemcrkcrtgcprgmvkvgdctpw
sdiecvhkes
Sequence, based on observed residues (ATOM records): (download)
>1d0gR (R:)
sspseglcppghhisedgrdcisckygqdysthwndllfclrctrcdsgevelspctttr
ntvcqceegtfreedspemcrkcrtgcprgmvkvgdctpwsdiecvhk
- Chain 'S':
Sequence, based on SEQRES records: (download)
>1d0gS (S:)
alitqqdlapqqraapqqkrsspseglcppghhisedgrdcisckygqdysthwndllfc
lrctrcdsgevelspctttrntvcqceegtfreedspemcrkcrtgcprgmvkvgdctpw
sdiecvhkes
Sequence, based on observed residues (ATOM records): (download)
>1d0gS (S:)
sspseglcppghhisedgrdcisckygqdysthwndllfclrctrcdsgevelspctttr
ntvcqceegtfreedspemcrkcrtgcprgmvkvgdctpwsdiecvhkes
- Chain 'T':
Sequence, based on SEQRES records: (download)
>1d0gT (T:)
alitqqdlapqqraapqqkrsspseglcppghhisedgrdcisckygqdysthwndllfc
lrctrcdsgevelspctttrntvcqceegtfreedspemcrkcrtgcprgmvkvgdctpw
sdiecvhkes
Sequence, based on observed residues (ATOM records): (download)
>1d0gT (T:)
sspseglcppghhisedgrdcisckygqdysthwndllfclrctrcdsgevelspctttr
ntvcqceegtfreedspemcrkcrtgcprgmvkvgdctpwsdiecvhkes