PDB entry 1cmx

View 1cmx on RCSB PDB site
Description: structural basis for the specificity of ubiquitin c-terminal hydrolases
Class: hydrolase
Keywords: ubiquitin hydrolase, ubiquitin, deubiquitinating enzyme, cysteine protease, enzyme specificity
Deposited on 1999-05-12, released 1999-07-27
The last revision prior to the SCOPe 2.06 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2.25 Å
R-factor: 0.248
AEROSPACI score: -1.69 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: protein (ubiquitin yuh1-ubal)
    Species: synthetic, synthetic
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1cmxa_
  • Chain 'B':
    Compound: protein (ubiquitin yuh1-ubal)
    Species: synthetic, synthetic
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1cmxb_
  • Chain 'C':
    Compound: protein (ubiquitin yuh1-ubal)
    Species: synthetic, synthetic
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1cmxc_
  • Chain 'D':
    Compound: protein (ubiquitin yuh1-ubal)
    Species: synthetic, synthetic
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1cmxd_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >1cmxA (A:)
    msgenravvpiesnpevftnfahklglknewayfdiysltepellaflprpvkaivllfp
    inedrksstsqqitssydviwfkqsvknacglyailhslsnnqsllepgsdldnflksqs
    dtsssknrfddvttdqfvlnvikenvqtfstgqseapeatadtnlhyityveenggifel
    dgrnlsgplylgksdptatdlieqelvrvrvasymenaneedvlnfamlglgpnw
    

    Sequence, based on observed residues (ATOM records): (download)
    >1cmxA (A:)
    ravvpiesnpevftnfahklglknewayfdiysltepellaflprpvkaivllfpindvi
    wfkqsvknacglyailhslsnnqsllepgsdldnflksqsdtsssknrfddvttdqfvln
    vikenvqtfstgqseapeatadtnlhyityveenggifeldgrnlsgplylgksdptatd
    lieqelvrvrvasymenaneedvlnfamlglgpn
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1cmxB (B:)
    mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
    iqkestlhlvlrlrgg
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >1cmxC (C:)
    msgenravvpiesnpevftnfahklglknewayfdiysltepellaflprpvkaivllfp
    inedrksstsqqitssydviwfkqsvknacglyailhslsnnqsllepgsdldnflksqs
    dtsssknrfddvttdqfvlnvikenvqtfstgqseapeatadtnlhyityveenggifel
    dgrnlsgplylgksdptatdlieqelvrvrvasymenaneedvlnfamlglgpnw
    

    Sequence, based on observed residues (ATOM records): (download)
    >1cmxC (C:)
    avvpiesnpevftnfahklglknewayfdiysltepellaflprpvkaivllfpviwfkq
    svknacglyailhslsnnqsllepgsdldnflksqsdtsssknrfddvttdqfvlnvike
    nvqtfstgqseapeatadtnlhyityveenggifeldgrnlsgplylgksdptatdlieq
    elvrvrvasymenaneedvlnfamlglgpn
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >1cmxD (D:)
    mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
    iqkestlhlvlrlrgg
    

    Sequence, based on observed residues (ATOM records): (download)
    >1cmxD (D:)
    ktltgqqrllvlrlrgg