PDB entry 1cg9

View 1cg9 on RCSB PDB site
Description: complex recognition of the supertypic bw6-determinant on hla-b and-c molecules by the monoclonal antibody sfr8-b6
Class: MHC class I
Keywords: MHC class I, histocompatibility complex, hla b3501, complex (MHC class I/ peptide), sfr8-b6 epitope
Deposited on 1999-03-25, released 2003-11-18
The last revision prior to the SCOPe 2.02 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: 0.201
AEROSPACI score: 0.31 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: protein (hla class I histocompatibility antigen, b-35 b* 3501 alpha chain)
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P30685 (0-276)
      • random mutagenesis (12)
    Domains in SCOPe 2.02: d1cg9a1, d1cg9a2
  • Chain 'B':
    Compound: protein (beta-2-microglobulin)
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P61769 (0-99)
      • cloning artifact (0)
    Domains in SCOPe 2.02: d1cg9b_
  • Chain 'C':
    Compound: protein (ebna-6 nuclear protein (ebna-3c) (ebna-4b))
    Species: synthetic, synthetic
    Database cross-references and differences (RAF-indexed):
    • Uniprot P03204 (0-8)
      • mutation (3)
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1cg9A (A:)
    gshsmryfytamfrpgrgeprfiavgyvddtqfvrfdsdaasprteprapwieqegpeyw
    drntqifktntqtyreslrnlrgyynqseagshiiqrmygcdlgpdgrllrghdqsaydg
    kdyialnedlsswtaadtaaqitqrkweaarvaeqlrayleglcvewlrrylengketlq
    radppkthvthhpvsdheatlrcwalgfypaeitltwqrdgedqtqdtelvetrpagdrt
    fqkwaavvvpsgeeqrytchvqheglpkpltlrweps
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1cg9B (B:)
    miqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskd
    wsfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdm
    

  • Chain 'C':
    No sequence available.