PDB entry 1a6t
View 1a6t on RCSB PDB site
Description: fab fragment of mab1-ia monoclonal antibody to human rhinovirus 14 nim-ia site
Class: immunoglobulin
Keywords: immunoglobulin, neutralizes human rhinovirus, igg1
Deposited on
1998-03-03, released
1998-05-27
The last revision prior to the SCOP 1.73 freeze date was dated
1998-05-27, with a file datestamp of
2007-06-04.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: 0.169
AEROSPACI score: 0.31
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: igg1 fab1-ia fab (light chain)
Species: MUS MUSCULUS
Database cross-references and differences (RAF-indexed):
- PIR S25058 (0-209)
- conflict (1)
- conflict (4)
- conflict (10)
- conflict (19)
- conflict (24)
- conflict (30)
- conflict (38)
- conflict (40)
- conflict (44)
- conflict (48)
- conflict (51)
- conflict (63)
- conflict (69)
- conflict (75-76)
- conflict (89)
- conflict (92)
- conflict (98)
Domains in SCOP 1.73: d1a6ta1, d1a6ta2 - Chain 'B':
Compound: igg1 fab1-ia fab (heavy chain)
Species: MUS MUSCULUS
Database cross-references and differences (RAF-indexed):
- PIR S38950 (2-216)
- conflict (9)
- conflict (12)
- conflict (27)
- conflict (29-30)
- conflict (33)
- conflict (39-40)
- conflict (42-43)
- conflict (49-51)
- conflict (53-54)
- conflict (56)
- conflict (58-59)
- conflict (61)
- conflict (68)
- conflict (73)
- conflict (81-82)
- conflict (94)
- conflict (98-103)
- conflict (105)
- conflict (112)
- conflict (121)
- conflict (133)
- conflict (176)
- conflict (195)
Domains in SCOP 1.73: d1a6tb1, d1a6tb2 - Chain 'C':
Compound: igg1 fab1-ia fab (light chain)
Species: MUS MUSCULUS
Database cross-references and differences (RAF-indexed):
- PIR S25058 (0-209)
- conflict (1)
- conflict (4)
- conflict (10)
- conflict (19)
- conflict (24)
- conflict (30)
- conflict (38)
- conflict (40)
- conflict (44)
- conflict (48)
- conflict (51)
- conflict (63)
- conflict (69)
- conflict (75-76)
- conflict (89)
- conflict (92)
- conflict (98)
Domains in SCOP 1.73: d1a6tc1, d1a6tc2 - Chain 'D':
Compound: igg1 fab1-ia fab (heavy chain)
Species: MUS MUSCULUS
Database cross-references and differences (RAF-indexed):
- PIR S38950 (2-216)
- conflict (9)
- conflict (12)
- conflict (27)
- conflict (29-30)
- conflict (33)
- conflict (39-40)
- conflict (42-43)
- conflict (49-51)
- conflict (53-54)
- conflict (56)
- conflict (58-59)
- conflict (61)
- conflict (68)
- conflict (73)
- conflict (81-82)
- conflict (94)
- conflict (98-103)
- conflict (105)
- conflict (112)
- conflict (121)
- conflict (133)
- conflict (176)
- conflict (195)
Domains in SCOP 1.73: d1a6td1, d1a6td2
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>1a6tA (A:)
qsvlsqspailsaspgekvimtcspsssvsymqwyqqkpgsspkpwiystsnlasgvpgr
fsgggsgtsfsltisgveaedaatyycqqysshpltfgggtklelkradaaptvsifpps
seqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstltl
tkdeyerhnsytceathktstspivksfnr
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>1a6tB (B:)
evqlqqsgpdlvkpgasvkisckasgysfstyymhwvkqshgkslewigrvdpdnggtsf
nqkfkgkailtvdkssstaymelgsltsedsavyycarrddyyfdfwgqgtsltvssakt
tppsvyplapvcggttgssvtlgclvkgyfpepvtltwnsgslssgvhtfpavlqsglyt
lsssvtvtsstwpsqtitcnvahpasstkvdkkiepr
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>1a6tC (C:)
qsvlsqspailsaspgekvimtcspsssvsymqwyqqkpgsspkpwiystsnlasgvpgr
fsgggsgtsfsltisgveaedaatyycqqysshpltfgggtklelkradaaptvsifpps
seqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstltl
tkdeyerhnsytceathktstspivksfnr
- Chain 'D':
Sequence; same for both SEQRES and ATOM records: (download)
>1a6tD (D:)
evqlqqsgpdlvkpgasvkisckasgysfstyymhwvkqshgkslewigrvdpdnggtsf
nqkfkgkailtvdkssstaymelgsltsedsavyycarrddyyfdfwgqgtsltvssakt
tppsvyplapvcggttgssvtlgclvkgyfpepvtltwnsgslssgvhtfpavlqsglyt
lsssvtvtsstwpsqtitcnvahpasstkvdkkiepr