Other Sequences 2.06

• This page contains sequence sets for people with special needs. For most users, we recommend the standard sequence sets.

• These are sequences for every PDB chain included in the Rapid Access Format PDB ATOM—SEQRES correspondence maps used to generate Astral:
  • Full set of Astral chain sequences, based on PDB SEQRES records, excluding known tags: download sequences (46.4 MB)

  • Full set of Astral chain sequences, based on PDB SEQRES records: download sequences (46.6 MB)

  • Full set of Astral chain sequences, based on PDB ATOM records: download sequences (44.5 MB)

  • Astral chain sequence subset, based on PDB SEQRES records, excluding known tags, nonredundant (less than 100% identity to each other): download sequences (11.7 MB), identifiers, or the verbose selection log.

  • Astral chain sequence subset, based on PDB SEQRES records, excluding known tags, less than 95% identity to each other: download sequences (5.8 MB), identifiers, or the verbose selection log.

  • Astral chain sequence subset, based on PDB SEQRES records, excluding known tags, less than 90% identity to each other: download sequences (5.3 MB), identifiers, or the verbose selection log.

  • Astral chain sequence subset, based on PDB SEQRES records, nonredundant (less than 100% identity to each other): download sequences (11.3 MB), identifiers, or the verbose selection log.

  • Astral chain sequence subset, based on PDB SEQRES records, less than 95% identity to each other: download sequences (5.9 MB), identifiers, or the verbose selection log.

  • Astral chain sequence subset, based on PDB SEQRES records, less than 90% identity to each other: download sequences (5.3 MB), identifiers, or the verbose selection log.

• These are sequences for domains in SCOPe classes beyond the first 7 (i.e., "h: Coiled coil proteins" and above).
  Note: The classification of proteins in SCOP classes beyond the first 7 has been described by the SCOP curator as not part of the proper SCOP classification.
  Therefore, these sequences are not recommended unless you really need them:
  • All Astral SCOPe genetic domain sequences, based on PDB SEQRES records, for SCOPe classes 8 and above: download sequences (1.3 MB)
    

  • All Astral SCOPe genetic domain sequences, based on PDB ATOM records, for SCOPe classes 8 and above: download sequences (1.3 MB)