SPACI score report for 2ny1 in ASTRAL 2.04:

PDB Entry: 2ny1
SPACI score: 0.41
AEROSPACI score: 0.41

Experiment type: XRAY
Resolution: 1.99
R-factor: 0.211
PCK1 PROCHECK Ramachandran: 1
PCK2 PROCHECK Chi-1 angle: 2
PCK3 PROCHECK H-bonds: 2
WCK1 WHAT_CHECK Packing: -1.078
WCK2 WHAT_CHECK Ramachandran: -1.852
WCK3 WHAT_CHECK Chi angles: -2.176
WCK4 WHAT_CHECK Backbone: 2.622

Note: Here are links to pages about PROCHECK and WHAT_CHECK.

Here is the full WHAT_CHECK report on this protein (linked from the WHAT_CHECK site).