SPACI score report for 2yhf in ASTRAL 2.03:

PDB Entry: 2yhf
SPACI score: 0.45
AEROSPACI score: 0.45

Experiment type: XRAY
Resolution: 1.9
R-factor: 0.219
PCK1 PROCHECK Ramachandran: 1
PCK2 PROCHECK Chi-1 angle: 1
PCK3 PROCHECK H-bonds: 2
WCK1 WHAT_CHECK Packing: -1.771
WCK2 WHAT_CHECK Ramachandran: -0.911
WCK3 WHAT_CHECK Chi angles: -0.369
WCK4 WHAT_CHECK Backbone: 2.162

Note: Here are links to pages about PROCHECK and WHAT_CHECK.

Here is the full WHAT_CHECK report on this protein (linked from the WHAT_CHECK site).