SPACI score report for 2y4v in ASTRAL 2.02:

PDB Entry: 2y4v
SPACI score: 0.46
AEROSPACI score: 0.46

Experiment type: XRAY
Resolution: 1.8
R-factor: 0.22954
PCK1 PROCHECK Ramachandran: 1
PCK2 PROCHECK Chi-1 angle: 2
PCK3 PROCHECK H-bonds: 2
WCK1 WHAT_CHECK Packing: -0.457
WCK2 WHAT_CHECK Ramachandran: 0.789
WCK3 WHAT_CHECK Chi angles: -0.989
WCK4 WHAT_CHECK Backbone: 5.179

Note: Here are links to pages about PROCHECK and WHAT_CHECK.

Here is the full WHAT_CHECK report on this protein (linked from the WHAT_CHECK site).