SPACI score report for 1j40 in ASTRAL 2.01:

PDB Entry: 1j40
SPACI score: 0.69
AEROSPACI score: 0.69

Experiment type: XRAY
Resolution: 1.45
R-factor: 0.166
PCK1 PROCHECK Ramachandran: 1
PCK2 PROCHECK Chi-1 angle: 1
PCK3 PROCHECK H-bonds: 1
WCK1 WHAT_CHECK Packing: -0.213
WCK2 WHAT_CHECK Ramachandran: 0.835
WCK3 WHAT_CHECK Chi angles: -0.01
WCK4 WHAT_CHECK Backbone: 1.007

Note: Here are links to pages about PROCHECK and WHAT_CHECK.

Here is the full WHAT_CHECK report on this protein (linked from the WHAT_CHECK site).