SPACI score report for 1nji in ASTRAL 2.01:

PDB Entry: 1nji
SPACI score: 0.27
AEROSPACI score: 0.27

Experiment type: XRAY
Resolution: 3
R-factor: 0.176
PCK1 PROCHECK Ramachandran: 1
PCK2 PROCHECK Chi-1 angle: 2
PCK3 PROCHECK H-bonds: 2
WCK1 WHAT_CHECK Packing: -3.797
WCK2 WHAT_CHECK Ramachandran: -3.321
WCK3 WHAT_CHECK Chi angles: -1.883
WCK4 WHAT_CHECK Backbone: -0.604

Note: Here are links to pages about PROCHECK and WHAT_CHECK.

Here is the full WHAT_CHECK report on this protein (linked from the WHAT_CHECK site).